DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt20

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_075745.1 Gene:Krt20 / 66809 MGIID:1914059 Length:431 Species:Mus musculus


Alignment Length:439 Identity:110/439 - (25%)
Similarity:196/439 - (44%) Gaps:102/439 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTA 119
            |:.:||||||||.|:::||:||..||||..:::...:|....|....:.:.|::.|.:..:.|..
Mouse    78 KLAMQNLNDRLANYLEKVRSLEQSNSRLEAQIKQWYETNAPSTIRDYSSYYAQIKELQNQVKDAQ 142

  Fly   120 RDRARA--EIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLN 182
            ...|:.  .||..:|..|:..||.:.::..:....|                             
Mouse   143 VQNAQCVLRIDNAKLAAEDFRLKFETERGMRIAVEA----------------------------- 178

  Fly   183 EDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQT 247
                    :|:.|.|.::    ||   ||.:.|||..|:.|.::|:...:.|.:|:...||    
Mouse   179 --------DLQGLSKVYD----NL---TLQKTDLEIQIEELNKDLALLKKEHQEEVEVLRR---- 224

  Fly   248 EYSEIDGRLSSEYDA----KLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNST 308
               ::...::.|.||    .|.:.:.|:|.:||...|.|..|.:..:|.:.|.||:..  |.|: 
Mouse   225 ---QLGNNVNVEVDAAPGLNLGEIMNEMRQRYEVLAQKNLQEAKEQFERQSQTLQQQV--TVNT- 283

  Fly   309 HKSIEELRSTRVRIDALNANINELE-QANADLNARIRDLERQLDNDRERHGQE-------IDLLE 365
                |||:...|::..|......|| :..:.|:.: ..|||.|::.:.|:..:       :..||
Mouse   284 ----EELKGFEVQVTELRRTYQNLEIELQSHLSMK-ESLERNLEDVKARYASQLAAIQEMLSSLE 343

  Fly   366 KELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPATNTATVQSFSQSLRN 430
            .:|:::|.:..:|.:|:..|:|||..|:.|||.|.:||.||:.:        |...|..:..:::
Mouse   344 AQLMQIRSDTERQNQEHNILLDIKTRLEQEIATYRRLLEGEDIK--------TTEYQLSTLEMKD 400

  Fly   431 STRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEID 479
            ..:           .::.:.||:|..|..|    ||:      |:|||:
Mouse   401 IKK-----------TRKIKTVVEEVVDGKV----VSS------EVKEIE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 97/367 (26%)
LTD 467..572 CDD:460003 4/13 (31%)
Krt20NP_075745.1 Head. /evidence=ECO:0000255 1..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Filament 76..385 CDD:459643 96/365 (26%)
Coil 1A. /evidence=ECO:0000255 77..112 18/33 (55%)
Linker 1. /evidence=ECO:0000255 113..130 2/16 (13%)
Coil 1B. /evidence=ECO:0000255 131..222 25/134 (19%)
Linker 12. /evidence=ECO:0000255 223..245 6/28 (21%)
Coil 2. /evidence=ECO:0000255 246..384 43/145 (30%)
Tail. /evidence=ECO:0000255 385..431 13/73 (18%)
Blue background indicates that the domain is not in the aligned region.

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