DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt81

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001159629.1 Gene:Krt81 / 64818 MGIID:1928858 Length:481 Species:Mus musculus


Alignment Length:411 Identity:101/411 - (24%)
Similarity:177/411 - (43%) Gaps:92/411 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GPQPPPPSTHSQTAS--SPLS----P----TRHSRVAEKVELQNLNDRLATYIDRVRNLETENSR 81
            ||.||..:|.|...|  :||:    |    .:|.   ||.:::.||.:.|.:||:||.||.:|  
Mouse    72 GPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHE---EKEQIKCLNSKFAAFIDKVRFLEQQN-- 131

  Fly    82 LTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKK 146
                                     :||||:                    |:..:         
Mouse   132 -------------------------KLLETK--------------------WQFYQ--------- 142

  Fly   147 TKECTTAEGNVR-MYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEE--------- 201
            .::|  .|.|:. ::|.....|..:.....||..:|..:||.|.:.:|..:|::||         
Mouse   143 NRKC--CESNMEPLFEGYIEALRREAECVEADSGRLAAELNHAQESMEGYKKRYEEEVSLRATAE 205

  Fly   202 -----TRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSE--IDGRLSSE 259
                 .:|:::...|.:.|||...::|.:|..|..:::.:|    .||..:..|:  |..::.:.
Mouse   206 NEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEE----TRILHSHISDTSIVVKMDNS 266

  Fly   260 YDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDA 324
            .|..:...:.|::|||::....:|.|.:|.|..|.:.::....|...:..::.||:......|..
Mouse   267 RDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEIKATVIRHGETLRRTREEINELNRMIQR 331

  Fly   325 LNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIK 389
            |.|.|...:..|..|.|.:...|:|.:........::..||..|.:.:::|...|||||::|:.|
Mouse   332 LTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEGALQKAKQDMACLLKEYQEVMNSK 396

  Fly   390 VSLDLEIAAYDKLLVGEEARL 410
            :.||:||..|.:||.|||.||
Mouse   397 LGLDVEITTYRRLLEGEEQRL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 88/371 (24%)
LTD 467..572 CDD:460003
Krt81NP_001159629.1 Head. /evidence=ECO:0000250 1..106 11/36 (31%)
Keratin_2_head <3..102 CDD:465068 10/29 (34%)
Filament 105..416 CDD:459643 88/375 (23%)
Coil 1A. /evidence=ECO:0000250 107..141 16/80 (20%)
Linker 1. /evidence=ECO:0000250 142..151 2/19 (11%)
Coil 1B. /evidence=ECO:0000250 152..252 23/103 (22%)
Linker 12. /evidence=ECO:0000250 253..269 2/15 (13%)
Coil 2. /evidence=ECO:0000250 270..413 39/142 (27%)
Tail. /evidence=ECO:0000250 414..481 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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