DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt71

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_064340.1 Gene:Krt71 / 56735 MGIID:1861586 Length:524 Species:Mus musculus


Alignment Length:427 Identity:110/427 - (25%)
Similarity:201/427 - (47%) Gaps:78/427 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PPPSTHSQTAS-SPLSP--------TRHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEV 86
            ||...|..|.: |.|:|        .:..|..|:.:::.||::.|::||:||.||.:|..|    
Mouse    99 PPGGIHQVTVNESLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVL---- 159

  Fly    87 QTTRDTVTR-ETTNIKN----IFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKK 146
            ||..:.:.: :..|.||    |.|..:...|:.|:..:.||.|.:.:::.:.:..|:.|.|.:::
Mouse   160 QTKWELLQQLDLNNCKNNLEPILEGHISNMRKQLETLSGDRVRLDSELRNVRDVVEDYKKKYEEE 224

  Fly   147 TKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETL 211
            ....|.||                                          .:|...:|:::....
Mouse   225 INRRTAAE------------------------------------------NEFVLLKKDVDAAYA 247

  Fly   212 SRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAK--LKQSLQELRAQ 274
            ::|:|:..:.::.:::.|...:...|:.:.    |:..|::...||.:.:..  |...:.|:|||
Mouse   248 NKVELQAKVDTMDQDIKFFKCLFEAEMAQI----QSHISDMSVILSMDNNRNLDLDSIIDEVRAQ 308

  Fly   275 YEEQMQINRDEIQSLYEDKIQRLQEAAARTSN---STHKSIEELRSTRVRIDALNANINELEQAN 336
            |||....::.|.::||:.|.|.||.||.|..:   :|...|.||  ||. |..|.:.|...::..
Mouse   309 YEEIALKSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEITEL--TRF-IQRLRSEIENAKKQA 370

  Fly   337 ADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDK 401
            ::|...|.|.|::.|:..:....::|.||..|.:.:||:.:.|:|||:||.:|::||:|||.|.|
Mouse   371 SNLETAIADAEQRGDSALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRK 435

  Fly   402 LLVGEEARLN------ITPATNTATVQSFSQSLRNST 432
            ||..||.|::      ::.:..::|..|.....|.||
Mouse   436 LLESEECRMSGEYSSPVSISIISSTSGSGGYGFRPST 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 96/364 (26%)
LTD 467..572 CDD:460003
Krt71NP_064340.1 Head 1..130 8/30 (27%)
Keratin_2_head 15..127 CDD:465068 7/27 (26%)
Filament 130..443 CDD:459643 96/365 (26%)
Coil 1A 131..166 14/38 (37%)
Linker 1 167..185 5/17 (29%)
Coil 1B 186..277 17/132 (13%)
Linker 12 278..301 5/22 (23%)
Coil 2 302..440 53/140 (38%)
Tail 441..524 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 493..524
Blue background indicates that the domain is not in the aligned region.

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