DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and krt8.2

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_031748531.1 Gene:krt8.2 / 549551 XenbaseID:XB-GENE-876686 Length:408 Species:Xenopus tropicalis


Alignment Length:437 Identity:109/437 - (24%)
Similarity:206/437 - (47%) Gaps:84/437 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSKSRRAGTATPQPGNTSTPRPPSAGPQPPPPSTHSQTASSPLSPTRHS---------------- 50
            |..||..|:.:.:|   |..| .|.|.||....:.|....|.|.|:..|                
 Frog    13 SFSSRSHGSLSGRP---SVYR-ISTGFQPAMQRSSSNLNLSRLPPSSSSAFLLSSLPNMEVDPQM 73

  Fly    51 ---RVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETR 112
               |..||.:::.||::...:||:||:||.:|..|..::...::         |:.:::.:.:  
 Frog    74 QQLRNQEKEQIKGLNNQFVNFIDKVRDLEKQNKILETQLALLKE---------KDAYKSNIDQ-- 127

  Fly   113 RLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANAD 177
              :...:.:|.:.:||  .|..|.|:|:.:|..              .:....||.|:|      
 Frog   128 --ITQVSANRLKQQID--ALLHEKEKLQMELHN--------------MQGLVEELKNRY------ 168

  Fly   178 RKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESR 242
                .:|:|..    .::...|..|:|:|:...|.:||.|:.:.:|.:|:.:..|::.:|:.|..
 Frog   169 ----EDDINRR----NQIENDFVLTKKDLDDAYLHKVDNESKLDTLTDEIQYLKQLYDEELKELE 225

  Fly   243 RIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNS 307
            .  |.:.:::...:.:..|.::|..:.|::|||:...|.::.|.:..|..||:.::       |.
 Frog   226 H--QVQNAKVTVAMDNSRDLEMKHIMDEVKAQYQAMAQKSQQEAEYWYNCKIEDME-------NQ 281

  Fly   308 THKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQE--------IDLL 364
            ..::.|||::.:..::.||..|......|..|..:..:||..: :..|.||::        |..|
 Frog   282 VKRNNEELKALKNEVNDLNRMIQRANSENEALKNQRANLESAI-SMAEEHGEDAVRNAKSHIRDL 345

  Fly   365 EKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLN 411
            |:.|.|.:::|..:::|||:||:||::||:|||.|.|||.|||.|::
 Frog   346 EEALKRAKQDMALKVREYQELMNIKLALDIEIATYRKLLEGEETRMH 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 91/362 (25%)
LTD 467..572 CDD:460003
krt8.2XP_031748531.1 Filament 79..390 CDD:459643 91/363 (25%)
Blue background indicates that the domain is not in the aligned region.

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