DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and krt95

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001002392.1 Gene:krt95 / 436665 ZFINID:ZDB-GENE-040718-88 Length:425 Species:Danio rerio


Alignment Length:389 Identity:98/389 - (25%)
Similarity:166/389 - (42%) Gaps:67/389 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRR 113
            ::::.||..:||||||||:||::||.||..|:  |:|.|            |::.:|.:....:|
Zfish    87 YTQLNEKTTMQNLNDRLASYIEKVRCLEAANA--TLEQQ------------IRDYYEKKGPICQR 137

  Fly   114 LLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADR 178
                          |....|.....||.::         |..||          ||.......|.
Zfish   138 --------------DYSCYWNTINCLKEQI---------AAANV----------NNANILLQIDN 169

  Fly   179 KKLNEDLNEALKELERLRKQFEET-----RKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEI 238
            .||..|......|.|...:|..|:     |:.|:|.|||:.:|||.|::|..:|....:.|.:::
Zfish   170 SKLAADDFRIKYEHEIAVRQCVESDIANLRRLLDQATLSKAELENQIETLIGDLECLKKNHQEDV 234

  Fly   239 NESRRIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRL-QEAAA 302
              :..:.|...|::...:.:.....|.:.|.::|..||..:..:|.|.:..:::|..:| ::.|.
Zfish   235 --AALMCQLTNSKVCVEVDAAPQQDLNKILDDIRCHYENIIDKHRREQECWFKEKTAQLCKDVAG 297

  Fly   303 RTS--NSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLE 365
            .|.  .::...|.:||.|   :..|...:.........|.|.:|:.|.:.......:.:.|:..|
Zfish   298 DTECLETSRSQISDLRRT---LQCLEIELQSQLSMKCALEASLRETEARYSTMLAGYQKHINTYE 359

  Fly   366 KELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLN-------ITPATNTATVQ 422
            .||.::|..:.||.::|..|:|||..|:.|||.|..||..:..:..       .||....|..|
Zfish   360 AELSQVRAGIEQQGRDYDALLDIKSRLEQEIATYRCLLENQPIKTQEGGVFVCSTPVETVACKQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 94/362 (26%)
LTD 467..572 CDD:460003
krt95NP_001002392.1 Filament 91..398 CDD:459643 93/358 (26%)
Blue background indicates that the domain is not in the aligned region.

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