Protein Alignment Lam and prph

DIOPT Version :9

• Sequence 1: NP_001245892.1
• Gene: Lam / 33782
• FlyBaseID: FBgn0002525
• Length: 622
• Species: Drosophila melanogaster
• Sequence 2: NP_001001235.1
• Gene: prph / 407916
• XenbaseID: XB-GENE-493857
• Length: 456
• Species: Xenopus tropicalis
• Alignment Length: 500
• Identity: 139/500 - (27%)
• Similarity: 231/500 - (46%)
• Gaps: 114/500 - (22%)

  Fly     2 SSKSRRAGTATPQPGNTSTPR---PPSAGPQPPPPSTHSQTASSPLSPTRHS------------- 50
            ||.||           .||.|   .||.||.....|:..:..||  :|.|.|
 Frog    28 SSSSR-----------LSTSRHFGSPSPGPSSRSSSSAFRVRSS--TPVRVSLDRVDFSVAEAVN 79

  Fly    51 ------RVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELL 109
                  |..||.|||.||||.|::|::||.||.:|:.|..|:...|   ::|.|...::.:.||.
 Frog    80 QEFLTTRSNEKAELQELNDRFASFIEKVRYLEQQNAVLVTEINQAR---SKEPTRASDLCQQELR 141

  Fly   110 ETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQA 174
            |.||.|:...:||.|.:::...|.|:...||.:||::..:...||.|:.::
 Frog   142 ELRRQLELLGKDRDRIQVERDNLAEDLAFLKQRLDEEVHKREDAENNLVLF-------------- 192

  Fly   175 NADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEIN 239
                                        ||:::..||||::||..|:||.:|:.|..::|.:|:|
 Frog   193 ----------------------------RKDVDDATLSRLELERKIESLMDEIEFLKKLHEEELN 229

  Fly   240 ESRRIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAART 304
            :.:...|.:...::...:.:.|  |..:|:::|:|||.....|..|.:..|:.|...|.:||.|.
 Frog   230 DVQVTVQAQPIHMEIEAAKQPD--LTSALRDIRSQYETIAAKNLQESEEWYKSKFADLSDAATRN 292

  Fly   305 SNSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELI 369
            |.:..::.:::..:|.:|.:|...|:.|:..|..|..:::|:|.|...:...:...|..||:|:.
 Frog   293 SEALRQAKQDMNESRRQIQSLTCEIDGLKGTNEALLRQMKDMEEQFGVEASNYQDTIGRLEQEVQ 357

  Fly   370 RLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPATNTATVQSFSQSLRNSTRA 434
            .::|||::.|:|||||:::|::||:|||.|.|||.|||:|:                       |
 Frog   358 HMKEEMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRI-----------------------A 399

  Fly   435 TPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEID 479
            .|.....|.::|.....||.|.:         |..:..|.||.|:
 Frog   400 VPIHSLTSLSIKSPAPEVDRSTE---------AHTRKTVVIKTIE 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lam	NP_001245892.1	Filament	54..409	CDD:278467	108/354 (31%)
		Ax_dynein_light	<283..377	CDD:287215	25/93 (27%)
		LTD	466..572	CDD:279300	5/13 (38%)
prph	NP_001001235.1	Filament_head	10..87	CDD:368088	17/71 (24%)
		Filament	88..397	CDD:365827	108/355 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910