DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt87

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001003668.2 Gene:Krt87 / 406219 MGIID:3665486 Length:495 Species:Mus musculus


Alignment Length:415 Identity:101/415 - (24%)
Similarity:178/415 - (42%) Gaps:100/415 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GPQPPPPSTHSQTAS--SPLS----P----TRHSRVAEKVELQNLNDRLATYIDRVRNLETENSR 81
            ||.||..:|.|...|  :||:    |    .:|.   ||.:::.||.:.|.:||:||.||.:|  
Mouse    77 GPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHE---EKEQIKCLNSKFAAFIDKVRFLEQQN-- 136

  Fly    82 LTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKK 146
                                     :||||:                    |:..:         
Mouse   137 -------------------------KLLETK--------------------WQFYQ--------- 147

  Fly   147 TKECTTAEGNVR-MYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEE--------- 201
            .::|  .|.|:. ::|.....|..:.....||..:|..:||...:.:|..:|::||         
Mouse   148 NRKC--CESNMEPLFEGYIEALRREAECVEADSGRLAAELNHVQESMEGYKKRYEEEVALRATSE 210

  Fly   202 -----TRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSE--IDGRLSSE 259
                 .:|:::...|.:.|||...::|.:|..|..|::.:|    .|:..:..|:  :..::.:.
Mouse   211 NEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRQLYEEE----TRLLHSHISDTSVVVKMDNS 271

  Fly   260 YDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDA 324
            .|..:...:.|::|||::....:|.|.:|.|..|.:.::....|...:..::.||:......|..
Mouse   272 RDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGETLRRTREEINELNRMIQR 336

  Fly   325 LNANINELEQANADLNARIRDLERQ----LDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDL 385
            |.|.|...:..|..|.|.:...|:|    |.:.|.:..:    ||..|.:.:::|...|||||::
Mouse   337 LTAEIENAKCQNTKLEAAVTQSEQQGEAALTDARCKLAE----LEGALQKAKQDMACLLKEYQEV 397

  Fly   386 MDIKVSLDLEIAAYDKLLVGEEARL 410
            |:.|:.||:||..|.:||.|||.||
Mouse   398 MNSKLGLDVEIITYRRLLEGEEQRL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 88/375 (23%)
LTD 467..572 CDD:460003
Krt87NP_001003668.2 Head. /evidence=ECO:0000255 1..111 11/36 (31%)
Keratin_2_head <45..107 CDD:465068 10/29 (34%)
Filament 110..421 CDD:459643 88/379 (23%)
Coil 1A. /evidence=ECO:0000255 112..146 16/80 (20%)
Linker 1. /evidence=ECO:0000255 147..156 2/19 (11%)
Coil 1B. /evidence=ECO:0000255 157..257 22/103 (21%)
Linker 12. /evidence=ECO:0000255 258..274 1/15 (7%)
Coil 2. /evidence=ECO:0000255 275..418 41/146 (28%)
Tail. /evidence=ECO:0000255 419..494 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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