DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and KRT83

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_002273.3 Gene:KRT83 / 3889 HGNCID:6460 Length:493 Species:Homo sapiens


Alignment Length:399 Identity:108/399 - (27%)
Similarity:190/399 - (47%) Gaps:68/399 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GPQPPPPSTHSQTAS--SPLS----PTRHS-RVAEKVELQNLNDRLATYIDRVRNLETENSRLTI 84
            ||.||..:|.|...|  :||:    |.... :..||.::::||.|.|.:||:||.||.:|..|..
Human    77 GPSPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRFAAFIDKVRFLEQQNKLLET 141

  Fly    85 EVQTTRDTVTRE--TTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKT 147
            ::|..::   ||  .:|::.:| |..:||.|      |:....|.|..||               
Human   142 KLQFYQN---RECCQSNLEPLF-AGYIETLR------REAECVEADSGRL--------------- 181

  Fly   148 KECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLS 212
                            |:|||:........:||..|::  ||:  .....:|...:|:::...|.
Human   182 ----------------ASELNHVQEVLEGYKKKYEEEV--ALR--ATAENEFVALKKDVDCAYLR 226

  Fly   213 RVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSE--IDGRLSSEYDAKLKQSLQELRAQY 275
            :.|||..:::|.:|:.|..:::.:||    ||.|:..|:  :..:|.:..|..:...:.|::|||
Human   227 KSDLEANVEALIQEIDFLRRLYEEEI----RILQSHISDTSVVVKLDNSRDLNMDCIVAEIKAQY 287

  Fly   276 EEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANADLN 340
            ::....:|.|.:|.|..|.:.::....|...:..::.||:......|..|.|.:...:..|:.|.
Human   288 DDIATRSRAEAESWYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLE 352

  Fly   341 ARIRDLERQ----LDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDK 401
            |.:...|:|    |.:.|.:..:    ||..|.:.:::|...::|||::|:.|:.||:|||.|.:
Human   353 AAVAQSEQQGEAALSDARCKLAE----LEGALQKAKQDMACLIREYQEVMNSKLGLDIEIATYRR 413

  Fly   402 LLVGEEARL 410
            ||.|||.||
Human   414 LLEGEEQRL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 96/362 (27%)
LTD 467..572 CDD:460003
KRT83NP_002273.3 Head 1..111 10/33 (30%)
Keratin_2_head 4..107 CDD:465068 10/29 (34%)
Filament 110..421 CDD:459643 96/363 (26%)
Coil 1A 112..146 14/33 (42%)
Linker 1 147..156 2/11 (18%)
Coil 1B 157..257 32/145 (22%)
Linker 12 258..274 2/15 (13%)
Coil 2 275..418 39/146 (27%)
Tail 419..493 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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