DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and KRT82

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_149022.3 Gene:KRT82 / 3888 HGNCID:6459 Length:513 Species:Homo sapiens


Alignment Length:433 Identity:106/433 - (24%)
Similarity:196/433 - (45%) Gaps:100/433 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PSTHSQTASSPLS----PT-RHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDT 92
            |.|.:::...||:    || :..:..||.:::.||:|.|::|::||.||.:|..|    :|..:.
Human    94 PVTINESLLVPLALEIDPTVQRVKRDEKEQIKCLNNRFASFINKVRFLEQKNKLL----ETKWNF 154

  Fly    93 VTRE---TTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAE 154
            :.::   .|||:.|||..:...||.||..:.||.|.|.::..|.                 ...|
Human   155 MQQQRCCQTNIEPIFEGYISALRRQLDCVSGDRVRLESELCSLQ-----------------AALE 202

  Fly   155 GNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENT 219
            |..:.||                         |.|.....:..:|...:|:::...|.:.|||..
Human   203 GYKKKYE-------------------------EELSLRPCVENEFVALKKDVDTAFLMKADLETN 242

  Fly   220 IQSLREELSFKDQIHSQEINESRRIKQTEYSE--IDGRLSSEYDAKLKQSLQELRAQYEEQMQIN 282
            .::|.:|:.|...::.:||    .:.|::.||  :..::.:..:..:...:.|::|||::....:
Human   243 AEALVQEIDFLKSLYEEEI----CLLQSQISETSVIVKMDNSRELDVDGIIAEIKAQYDDIASRS 303

  Fly   283 RDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLE 347
            :.|.::.|:.:.:.|     |.:...|  .:.||:.:..|..:|..|..|:|...::.|:...||
Human   304 KAEAEAWYQCRYEEL-----RVTAGNH--CDNLRNRKNEILEMNKLIQRLQQETENVKAQRCKLE 361

  Fly   348 RQLDNDRERHGQ--------EIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLV 404
            ..: .:.|:.|:        ::..||:.|.:.:::|...|||||::|:.|:.||:|||.|.:||.
Human   362 GAI-AEAEQQGEAALNDAKCKLAGLEEALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLE 425

  Fly   405 GEEARL-------NI-----------------TPATNTATVQS 423
            |||.||       ||                 ||..:|..::|
Human   426 GEEHRLCEGIGPVNISVSSSKGAFLYEPCGVSTPVLSTGVLRS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 92/367 (25%)
LTD 467..572 CDD:460003
KRT82NP_149022.3 Head 1..120 6/25 (24%)
Keratin_2_head <61..116 CDD:465068 6/21 (29%)
Filament 120..430 CDD:459643 92/367 (25%)
Coil 1A 121..155 13/37 (35%)
Linker 1 156..165 1/8 (13%)
Coil 1B 166..266 29/145 (20%)
Linker 12 267..283 2/15 (13%)
Coil 2 284..427 40/150 (27%)
Tail 428..513 9/41 (22%)
Blue background indicates that the domain is not in the aligned region.

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