DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lam and KRT1

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_006112.3 Gene:KRT1 / 3848 HGNCID:6412 Length:644 Species:Homo sapiens


Alignment Length:414 Identity:113/414 - (27%)
Similarity:211/414 - (50%) Gaps:60/414 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GPQPPPPS----THSQTASSPLS-----PTRHSRVAEKVELQNLNDRLATYIDRVRNLETENSRL 82
            ||..||..    |.:|:...||:     ..:..:..|:.::::||::.|::||:||.||.:|..|
Human   144 GPVCPPGGIQEVTINQSLLQPLNVEIDPEIQKVKSREREQIKSLNNQFASFIDKVRFLEQQNQVL 208

  Fly    83 TI--EVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDK 145
            ..  |:....||.|| |.|::..||:.:...||.:|....|::|.:.::|.:.:..|:.:||   
Human   209 QTKWELLQQVDTSTR-THNLEPYFESFINNLRRRVDQLKSDQSRLDSELKNMQDMVEDYRNK--- 269

  Fly   146 KTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQET 210
                          ||   :|:|.:.|..|                      :|...:|:::...
Human   270 --------------YE---DEINKRTNAEN----------------------EFVTIKKDVDGAY 295

  Fly   211 LSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAK--LKQSLQELRA 273
            :::|||:..:.:|::|:.|...::..|:::    .||:.||.:..||.:.:..  |...:.|::|
Human   296 MTKVDLQAKLDNLQQEIDFLTALYQAELSQ----MQTQISETNVILSMDNNRSLDLDSIIAEVKA 356

  Fly   274 QYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANAD 338
            |||:..|.::.|.:|||:.|.:.||..|.|..:|...|..|:......|..|.:.|:.:::..::
Human   357 QYEDIAQKSKAEAESLYQSKYEELQITAGRHGDSVRNSKIEISELNRVIQRLRSEIDNVKKQISN 421

  Fly   339 LNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLL 403
            |...|.|.|::.:|..:....:::.||..|.:.:|::.:.|::||:||:.|::||||||.|..||
Human   422 LQQSISDAEQRGENALKDAKNKLNDLEDALQQAKEDLARLLRDYQELMNTKLALDLEIATYRTLL 486

  Fly   404 VGEEARLNITPATNTATVQSFSQS 427
            .|||:|::...|.|.:...|.|.:
Human   487 EGEESRMSGECAPNVSVSVSTSHT 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 100/358 (28%)
LTD 467..572 CDD:460003
KRT1NP_006112.3 Head 2..179 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..47
Keratin_2_head <145..176 CDD:465068 7/30 (23%)
Filament 180..492 CDD:459643 100/358 (28%)
Coil 1A 180..215 13/34 (38%)
Linker 1 216..234 8/18 (44%)
Coil 1B 235..326 24/136 (18%)
Linker 12 327..350 7/22 (32%)
Coil 2 351..489 45/137 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..523 7/22 (32%)
Tail 490..644 6/21 (29%)
Keratin_2_tail 493..>512 CDD:406591 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..644
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.