DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and KRT26

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_853517.2 Gene:KRT26 / 353288 HGNCID:30840 Length:468 Species:Homo sapiens


Alignment Length:449 Identity:106/449 - (23%)
Similarity:192/449 - (42%) Gaps:77/449 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HSRVA--EKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLET 111
            ||.::  |||.:||||||||:|:|.|..||..|:.|              ...||..:|      
Human    76 HSLLSGNEKVTMQNLNDRLASYLDHVHALEEANADL--------------EQKIKGWYE------ 120

  Fly   112 RRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTA----EGNVRMYESRANELNNKYN 172
             :....::|:.   :.|..|.:...|:||.::...| .|..:    ..|.|:   .|::...||.
Human   121 -KCEPGSSREH---DHDYSRYFSVIEDLKRQIISAT-ICNASIVLQNDNARL---TADDFRLKYE 177

  Fly   173 QANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQE 237
            ...|....:..|.:              ..|:.|::.||...|||...::|.|||::..:.|.:|
Human   178 NELALHHSVEADTS--------------GLRRVLDELTLCTTDLEIQCETLSEELTYLKKSHEEE 228

  Fly   238 INESRRIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAA 302
            :..   ::.|....::..:::.....|...|..:||:||:..:.||.:.::.:.::...||:..:
Human   229 MEV---LQYTAGGNVNVEMNATPGVDLTVLLNNMRAEYEDLAEQNRKDAEAWFNERSATLQQQIS 290

  Fly   303 RTSNSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKE 367
            ....:...:..||...:..:..|...:..|..........:.:.|....|..::...:|.::|::
Human   291 DHEGAATAARNELTELKRNLQTLEIELQSLMAVKHSYECSLAETEGNYCNQLQQIQDQIGVMEEQ 355

  Fly   368 LIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNIT--PATNTATVQSFSQSLRN 430
            |.::|.|...|..||:.|:|:|:.|:.||..|..||.|||.:...|  .:.....|.|.:|: ::
Human   356 LQQIRTETEGQKLEYEQLLDVKIFLEKEIDIYCNLLDGEERKSKSTCYKSKGYRPVNSGNQA-KD 419

  Fly   431 STRATPSRRTPSAAVKRKRAVVDESED---------HSVADYYVSASAKGNVEIKEIDP 480
            ||..|        .||   .||:|.:.         |||.:   .:|...|:.:::..|
Human   420 STEET--------IVK---TVVEELDQIGNLLSLRVHSVEE---KSSKISNITVEQRVP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 86/358 (24%)
LTD 467..572 CDD:460003 3/14 (21%)
KRT26NP_853517.2 Head. /evidence=ECO:0000255 1..82 2/5 (40%)
Filament 82..395 CDD:459643 84/357 (24%)
Coil 1A. /evidence=ECO:0000255 83..118 20/48 (42%)
Linker 1. /evidence=ECO:0000255 119..140 4/30 (13%)
Coil 1B. /evidence=ECO:0000255 141..232 25/111 (23%)
Linker 12. /evidence=ECO:0000255 233..255 2/21 (10%)
Coil 2. /evidence=ECO:0000255 256..394 32/137 (23%)
Tail. /evidence=ECO:0000255 395..465 19/85 (22%)

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