DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and KRT27

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_853515.2 Gene:KRT27 / 342574 HGNCID:30841 Length:459 Species:Homo sapiens


Alignment Length:552 Identity:122/552 - (22%)
Similarity:220/552 - (39%) Gaps:156/552 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSKSRRAGTATPQPGNTSTPRPPSAGP---------QPPPPSTHS-------------------Q 38
            ||.|||.|:.    |.|.:.|..|.|.         .|...|..|                   .
Human     6 SSTSRRLGSC----GGTGSVRLSSGGAGFGAGNTCGVPGIGSGFSCAFGGSSSAGGYGGGLGGGS 66

  Fly    39 TASSPLSPTRHSRVA--EKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIK 101
            .:.:..:...|..::  |||.:||||||||:|::.||.||..|:.|              ...||
Human    67 ASCAAFTGNEHGLLSGNEKVTMQNLNDRLASYLENVRALEEANADL--------------EQKIK 117

  Fly   102 NIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESR--- 163
            ..:|.....:.|.||.          |..|.:...:||||::    ...||:..:|.:....   
Human   118 GWYEKFGPGSCRGLDH----------DYSRYFPIIDELKNQI----ISATTSNAHVVLQNDNARL 168

  Fly   164 -ANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREEL 227
             |::...|:....|..:.:..|:|              ..|:.|::.||.|.|||..:::|.|||
Human   169 TADDFRLKFENELALHQSVEADIN--------------GLRRVLDELTLCRTDLEIQLETLSEEL 219

  Fly   228 SFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYED 292
            ::..:.|.:|:   :.::......::..:::.....|...|..:||:||...:.||.:.::.:.:
Human   220 AYLKKNHEEEM---KALQCAAGGNVNVEMNAAPGVDLTVLLNNMRAEYEALAEQNRRDAEAWFNE 281

  Fly   293 KI----QRLQEAAARTSNSTHKSIE---ELRSTRVRIDALNANINELE----QANADLNARIRDL 346
            |.    |::.:.|..|:::.::.||   .|::..:.:.:|.|..:.||    :..::..|::..:
Human   282 KSASLQQQISDDAGATTSARNELIEMKRTLQTLEIELQSLLATKHSLECSLTETESNYCAQLAQI 346

  Fly   347 ERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLN 411
            :.|           |..||::|.::|.|...|..||:.|:||||.|:.||..|..|:.||:...:
Human   347 QAQ-----------IGALEEQLHQVRTETEGQKLEYEQLLDIKVHLEKEIETYCLLIDGEDGSCS 400

  Fly   412 ITPATNTATVQSFSQSLRNSTRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIK 476
                             ::.....|..:|..::   |..:|                   ...::
Human   401 -----------------KSKGYGGPGNQTKDSS---KTTIV-------------------KTVVE 426

  Fly   477 EIDPEGKFV------------RLFNKGSEEVA 496
            ||||.||.:            ::.||..:.|:
Human   427 EIDPRGKVLSSRVHTVEEKSTKVNNKNEQRVS 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 94/369 (25%)
LTD 467..572 CDD:460003 9/42 (21%)
KRT27NP_853515.2 Head. /evidence=ECO:0000255 1..83 15/80 (19%)
Filament 83..396 CDD:459643 93/368 (25%)
Coil 1A. /evidence=ECO:0000255 84..119 20/48 (42%)
Linker 1. /evidence=ECO:0000255 120..141 6/30 (20%)
Coil 1B. /evidence=ECO:0000255 142..233 26/111 (23%)
Linker 12. /evidence=ECO:0000255 234..256 1/21 (5%)
Coil 2. /evidence=ECO:0000255 257..395 39/148 (26%)
Tail. /evidence=ECO:0000255 396..459 13/102 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..459 3/23 (13%)

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