DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and KRT79

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_787028.1 Gene:KRT79 / 338785 HGNCID:28930 Length:535 Species:Homo sapiens


Alignment Length:430 Identity:110/430 - (25%)
Similarity:196/430 - (45%) Gaps:94/430 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GPQPPPPSTHSQTASSPLSPTRH---------SRVAEKVELQNLNDRLATYIDRVRNLETENSRL 82
            ||..||......|.:..|....|         .|..|:.:::.||::.|::||:||.||.:|..|
Human   106 GPACPPGGIQEVTVNQSLLTPLHVEIDPEIQRVRTQEREQIKTLNNKFASFIDKVRFLEQQNKVL 170

  Fly    83 -----TIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNK 142
                 .::.|.....|||  .|::.:|||.|...|..||....:|.|.:.:::.:.:..|:.|||
Human   171 ETKWALLQEQGQNLGVTR--NNLEPLFEAYLGSMRSTLDRLQSERGRLDSELRNVQDLVEDFKNK 233

  Fly   143 LDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLE 207
            .:.:..:.|.||                                          .:|...:|:::
Human   234 YEDEINKHTAAE------------------------------------------NEFVVLKKDVD 256

  Fly   208 QETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAK--LKQSLQE 270
            ...:.|:||...:.:|.:|:.|..|::..|:::    .||..|..:..||.:.:..  |...:.|
Human   257 AAYMGRMDLHGKVGTLTQEIDFLQQLYEMELSQ----VQTHVSNTNVVLSMDNNRNLDLDSIIAE 317

  Fly   271 LRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNS---THKSIEELRSTRVRI----DALNAN 328
            ::||||...|.:|.|.::.|:.|.:.||..|.:..::   |...|.||..|..|:    ||....
Human   318 VKAQYELIAQRSRAEAEAWYQTKYEELQVTAGKHGDNLRDTKNEIAELTRTIQRLQGEADAAKKQ 382

  Fly   329 INELEQANADLNAR----IRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIK 389
            ..:|:.|.|:...|    ::|.:::|.:           |:..|.:.:|::|:.|::||:||::|
Human   383 CQQLQTAIAEAEQRGELALKDAQKKLGD-----------LDVALHQAKEDLTRLLRDYQELMNVK 436

  Fly   390 VSLDLEIAAYDKLLVGEEARL--------NITPATNTATV 421
            ::||:|||.|.|||..||:|:        :|:...|:.||
Human   437 LALDVEIATYRKLLESEESRMSGECPSAVSISVTGNSTTV 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 97/372 (26%)
LTD 467..572 CDD:460003
KRT79NP_787028.1 Head 1..141 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Keratin_2_head 30..138 CDD:465068 7/31 (23%)
Filament 141..456 CDD:459643 97/373 (26%)
Coil 1A 142..177 12/34 (35%)
Linker 1 178..198 7/21 (33%)
Coil 1B 199..290 23/136 (17%)
Linker 12 291..314 6/22 (27%)
Coil 2 315..453 46/148 (31%)
Tail 454..535 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

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