Sequence 1: | NP_001245892.1 | Gene: | Lam / 33782 | FlyBaseID: | FBgn0002525 | Length: | 622 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_024306458.1 | Gene: | GFAP / 2670 | HGNCID: | 4235 | Length: | 540 | Species: | Homo sapiens |
Alignment Length: | 507 | Identity: | 144/507 - (28%) |
---|---|---|---|
Similarity: | 227/507 - (44%) | Gaps: | 96/507 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 RRAGTATPQPGNTSTPRPPSAGPQPPPPSTHSQTASSPLSP-TRHSRVAEKVELQNLNDRLATYI 69
Fly 70 DRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWE 134
Fly 135 ENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELE------ 193
Fly 194 -----------RLRKQFEE-------------TRKNLEQETLSRVDLENTIQSLREELSFKDQIH 234
Fly 235 SQEINE--SRRIKQTEYSEIDGRLSSEYDAK--LKQSLQELRAQYEEQMQINRDEIQSLYEDKIQ 295
Fly 296 RLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQE 360
Fly 361 -------IDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPATNT 418
Fly 419 ATVQSFSQSLRNSTRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAK 470 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lam | NP_001245892.1 | Filament | 54..409 | CDD:278467 | 120/395 (30%) |
Ax_dynein_light | <283..377 | CDD:287215 | 27/100 (27%) | ||
LTD | 466..572 | CDD:279300 | 1/5 (20%) | ||
GFAP | XP_024306458.1 | Filament_head | 4..66 | CDD:309741 | 11/45 (24%) |
Filament | 68..444 | CDD:306535 | 120/396 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |