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Protein Alignment Lam and Ina

DIOPT Version :9

Sequence 1:	NP_001245892.1	Gene:	Lam / 33782	FlyBaseID:	FBgn0002525	Length:	622	Species:	Drosophila melanogaster
Sequence 2:	NP_666212.3	Gene:	Ina / 226180	MGIID:	96568	Length:	501	Species:	Mus musculus

Alignment Length:	460	Identity:	138/460 - (30%)
Similarity:	211/460 - (45%)	Gaps:	90/460 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    51 RVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLL 115
            |..||.:||.||||.|.:|::|..|||:|..|..|:...|.. ..|.:.:..:|:.||.|.|..|
Mouse    91 RTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQR-HAEPSRVGELFQRELRELRAQL 154

  Fly   116 DDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKK 180
            ::.:..||:|.::...|.||.:.|:.:.::               |||..|        .|:|
Mouse   155 EEASSARAQALLERDGLAEEVQRLRARCEE---------------ESRGRE--------GAER-- 194

  Fly   181 LNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIK 245
                   |||..:|          :::..||:|:|||..::||.:||:|..|:|.:|:.|.....
Mouse   195 -------ALKAQQR----------DVDGATLARLDLEKKVESLLDELAFVRQVHDEEVAELLATL 242

  Fly   246 QTEYSEIDGRLSSEYD---AK--LKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTS 305
            |.     ..:.::|.|   ||  |..:|:|:|||||.....|....:..|:.|...|.|.|||::
Mouse   243 QA-----SSQAAAEVDVAVAKPDLTSALREIRAQYESLAAKNLQSAEEWYKSKFANLNEQAARST 302

  Fly   306 NSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQE-------IDL 363
            .:...|.||:...|.::.|....|..|..||..|..:|.:||       |||..|       |..
Mouse   303 EAIRASREEIHEYRRQLQARTIEIEGLRGANESLERQILELE-------ERHSAEVAGYQDSIGQ 360

  Fly   364 LEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEAR----------LNITP---- 414
            ||.:|...:.||.:.|:|||||:::|::||:|||||.|||.|||.|          ||..|
Mouse   361 LESDLRNTKSEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTGGLSISGLNPLPNPSY 425

  Fly   415 -------ATNTATVQSFSQSLRNSTRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGN 472
                   ::..:.|.|...||:....  ......|..|.:|.:.|.|..:.::.:..:|....|.
Mouse   426 LLPPRILSSTASKVSSAGLSLKKEEE--EEEEEASKEVSKKTSKVGEGFEETLGEAVISTKKTGK 488

  Fly   473 VEIKE 477
            ...:|
Mouse   489 SATEE 493

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.