Protein Alignment Lam and ifa-4

DIOPT Version :10

• Sequence 1: NP_476616.1
• Gene: Lam / 33782
• FlyBaseID: FBgn0002525
• Length: 622
• Species: Drosophila melanogaster
• Sequence 2: NP_508836.5
• Gene: ifa-4 / 180765
• WormBaseID: WBGene00002052
• Length: 575
• Species: Caenorhabditis elegans
• Alignment Length: 564
• Identity: 163/564 - (28%)
• Similarity: 266/564 - (47%)
• Gaps: 73/564 - (12%)

  Fly    45 SPTRHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELL 109
            |..|.||..||.|:..||||||:||::||.||.:|.::..::...|.....::|::|.::|.||.
 Worm    61 SAIRESRTREKKEMSELNDRLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELR 125

  Fly   110 ETRRLLDDTARDRARAEIDIKRLWEENEELKNKL-------DKKTKECTTAEGNVRMYESRANEL 167
            ..:.|:.|:.::||:.|..||:|.||....:|||       |...||.....|.:...|:....|
 Worm   126 SAKDLIADSDKERAQLEDQIKKLVEELNNYRNKLHEAERGADVTRKELDNVLGRLGALEAEIELL 190

  Fly   168 NNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQ 232
            ..:.:       .:.|.:....:|..|:.......|..:|||||:|:|.:|.:|:|.||..|..:
 Worm   191 KRRIS-------LMEESIGHLKRENHRMIDSLHHARNAVEQETLNRIDYQNQVQTLLEECDFIRR 248

  Fly   233 IHSQEINE-----SR--RIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLY 290
            ||..||::     ||  .::..||          :..:|..:::|:|::|:......|.:|:|.|
 Worm   249 IHDSEIHDLLAMASRDTTVENREY----------FKNELSSAIREIRSEYDHVSNTTRTDIESWY 303

  Fly   291 EDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRE 355
            :.|:|.:....:|.....:.:.||::..|..:..:...:.:||..|..|..:|.||..|::.|..
 Worm   304 KLKVQEIHTQNSRNCLEQNYAREEVKRLRTTLGDMRGKMADLEGRNLLLEKQIEDLNYQMEEDMR 368

  Fly   356 RHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPATNTAT 420
            .:.|.::..:..:.:||:|....:.|.|.|:|.|.:||.||..|.|:|.|||.|..:
 Worm   369 SYEQSLNDKDTSINKLRDESKILMVELQMLIDTKQTLDAEIVIYRKMLDGEENRAGL-------- 425

  Fly   421 VQSFSQSLRNSTRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFV 485
                .|.:....:.|...:|..  ::..|.:..|:..||  .|  |.|||||:.|:|.:|.||::
 Worm   426 ----RQLVEQVVKTTSIHQTKE--IESLRVLKGETTSHS--SY--SRSAKGNIAIQEAEPSGKYI 480

  Fly   486 RLFNKGSEEVAIGGWQLQRLINEKGP-------STTYKFHRSVRIEPNGVITVWSADTKASHEPP 543
            .|.|....:..||.|:|:|.|..|..       ..|.:..:||:|...|         :..|.||
 Worm   481 VLENISRRDENIGDWKLRRKIAGKREIVFTFPREFTLRAQKSVKIFARG---------QGVHSPP 536

  Fly   544 SSLVMK-SQKWVSADNTRTILLNSEGEAVANLDRIKRIVSQHTS 586
            .|||.. ...:.:.::..|.|.|.|||     ||...  ||..|
 Worm   537 DSLVYDLEDSFGTGNDVVTTLYNKEGE-----DRASH--SQRAS 573

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lam	NP_476616.1	Filament	54..409	CDD:459643	108/368 (29%)
		LTD	467..572	CDD:460003	36/112 (32%)
ifa-4	NP_508836.5	Filament	70..422	CDD:459643	108/368 (29%)
		LTD	463..570	CDD:460003	38/122 (31%)