Protein Alignment Lam and ifc-2

DIOPT Version :9

• Sequence 1: NP_001245892.1
• Gene: Lam / 33782
• FlyBaseID: FBgn0002525
• Length: 622
• Species: Drosophila melanogaster
• Sequence 2: NP_001362085.1
• Gene: ifc-2 / 180414
• WormBaseID: WBGene00002056
• Length: 1339
• Species: Caenorhabditis elegans
• Alignment Length: 564
• Identity: 130/564 - (23%)
• Similarity: 224/564 - (39%)
• Gaps: 158/564 - (28%)

  Fly    48 RHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETR 112
            |.:|..||.|:..||||||.||::||.||.:|..|:.::...|:..: ...::..:|:||:.:.:
 Worm   762 RDAREREKREIGLLNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFS-GGGHVSGLFDAEINQAK 825

  Fly   113 RLLDDTARDRARAEIDIKRLWEENEELKNK-LDKKTKECTTAEGNVRMYESRANELNNKYNQANA 176
            .:|:.|...|:..|.||..|..|.|..:.| ||                         ..|...|
 Worm   826 HILEQTTAHRSTFERDITGLSAEIEVFRKKWLD-------------------------AVNAVKA 865

  Fly   177 DRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINES 241
            .|:..:.|| :.|.::|.....|:...:.:|::.: |:..||            |.|:    ||.
 Worm   866 HREDHDVDL-DRLAKIEAEISLFKRKIRIVEEDVI-RIRREN------------DGIY----NEI 912

  Fly   242 RRIKQTEYSEID----------------GRLSSEYDAKLKQSL---------------------- 268
            .||||..::||.                ..|.:|.:.:::|.|
 Worm   913 ARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQELVFIRRDTTADNRDYFRHELQAA 977

  Fly   269 -QELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINEL 332
             :::||.||.....||.:|:..|.::|:::|:.:.|.:...:|  |||.|.|..:..:.:.:.|:
 Worm   978 IRDIRADYEAISIRNRQDIEVWYREQIRKIQDESVRVNPDLYK--EELISIRTTVTNVRSRLAEV 1040

  Fly   333 EQANADLNARIRDLERQLDNDRERHGQEIDLLEK--ELIRLREEMTQQLKEYQDLMDIKVSLDLE 395
            |..|..|...|.||:    |:.|....||.|.|:  ::..||::.|:...:.:.|.|.::||..|
 Worm  1041 EGRNFFLERLIDDLK----NNEEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCDNEISLRAE 1101

  Fly   396 IAAYDKLLVGEEARLNITPAT-NT----------ATVQSFSQSLRNSTRATPSRRTPSAAVKRKR 449
            |..|..||.|    .|:|..| ||          ..|...::.:..:||...|..|..:.|...|
 Worm  1102 IERYRILLNG----ANVTTYTSNTHGSGSGIAVGGVVGGSTRVISQTTRTHSSSNTSYSNVPASR 1162

  Fly   450 A-------VVDESEDHSVADYYVSASAKGNV-------------------------EIKEIDPEG 482
            .       |...|...::..:..||.|.|.:                         :.|.:|..|
 Worm  1163 GGYSISGNVGGISVGGTIGSHGASAHATGGIIGSGVQAHRGSVSSLITDKPRDRVHDEKGVDQSG 1227

  Fly   483 KFVRLFNKGS-------------------EEVAIGGWQLQRLIN 507
            :....:..|:                   ..|.:||:::::.:|
 Worm  1228 RHFHSWYLGTISINQVTPSYIELKNICKIRRVDVGGFRIEQSVN 1271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lam	NP_001245892.1	Filament	54..409	CDD:278467	102/396 (26%)
		Ax_dynein_light	<283..377	CDD:287215	27/95 (28%)
		LTD	466..572	CDD:279300	12/86 (14%)
ifc-2	NP_001362085.1	Filament	768..1111	CDD:365827	101/392 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	196	1.000	Domainoid score	I1825
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H7818
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D204815at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920