Sequence 1: | NP_001245892.1 | Gene: | Lam / 33782 | FlyBaseID: | FBgn0002525 | Length: | 622 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032717.2 | Gene: | Nefm / 18040 | MGIID: | 97314 | Length: | 848 | Species: | Mus musculus |
Alignment Length: | 452 | Identity: | 114/452 - (25%) |
---|---|---|---|
Similarity: | 216/452 - (47%) | Gaps: | 64/452 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 SRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRL 114
Fly 115 LDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRK 179
Fly 180 KLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRI 244
Fly 245 KQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTH 309
Fly 310 KSIEELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREE 374
Fly 375 MTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPATNTATVQSFSQ-SLRNSTRATPSR 438
Fly 439 -RTPSAAVKRK--RAVVDES--EDH---------SVADYYVSASA---KGNVEIKEIDPEGK 483 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lam | NP_001245892.1 | Filament | 54..409 | CDD:278467 | 91/354 (26%) |
Ax_dynein_light | <283..377 | CDD:287215 | 18/93 (19%) | ||
LTD | 466..572 | CDD:279300 | 9/21 (43%) | ||
Nefm | NP_032717.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..51 | ||
Head | 2..102 | 4/6 (67%) | |||
Filament_head | 10..97 | CDD:282575 | 1/1 (100%) | ||
Filament | 98..409 | CDD:278467 | 91/355 (26%) | ||
Coil 1A | 103..134 | 15/30 (50%) | |||
Linker 1 | 135..147 | 1/12 (8%) | |||
Coil 1B | 148..246 | 26/141 (18%) | |||
Linker 12 | 247..263 | 2/15 (13%) | |||
Coil 2A | 264..285 | 6/20 (30%) | |||
Linker 2 | 286..289 | 0/2 (0%) | |||
Coil 2B | 290..410 | 38/119 (32%) | |||
Tail | 411..848 | 20/91 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 482..785 | 8/19 (42%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |