Protein Alignment Lam and ifb-1

DIOPT Version :9

• Sequence 1: NP_001245892.1
• Gene: Lam / 33782
• FlyBaseID: FBgn0002525
• Length: 622
• Species: Drosophila melanogaster
• Sequence 2: NP_001379694.1
• Gene: ifb-1 / 173976
• WormBaseID: WBGene00002053
• Length: 589
• Species: Caenorhabditis elegans
• Alignment Length: 557
• Identity: 152/557 - (27%)
• Similarity: 267/557 - (47%)
• Gaps: 65/557 - (11%)

  Fly    33 PSTHSQTASSPLSPTRHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRET 97
            |:..:..|.|.|..|.    .||..||.|||||..|||||:.||.:|.:|..::...|....::|
 Worm    64 PALSANAAKSFLEATD----KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDT 124

  Fly    98 TNIKNIFEAELLETRRLLDDTARDRARAEIDIKR--------------LWEENEELKNKLDKKTK 148
            :.||..:...|...|:.:||.||.:|..::.:.|              :.:..|..:.|:.:.|.
 Worm   125 SEIKIKYSESLSTARKDIDDAARRKAEVDVKVARHRDDLAEYRSRYEDIQQRRESDREKISQWTN 189

  Fly   149 ECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSR 213
            ....|:..|.|..:|..:|.::..:..||..::.|:|.:|              |.:|:.||:.|
 Worm   190 AIADAQSEVEMLRARFKQLTDEEKRVTADNSRIWEELQKA--------------RSDLDDETIGR 240

  Fly   214 VDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQ 278
            :|.:|.:|:|.|||.|..::|.||:.|    .|...::........:..:|..::::::.:|:..
 Worm   241 IDFQNQVQTLMEELEFLRRVHEQEVKE----LQALLAQAPADTREFFKNELALAIRDIKDEYDII 301

  Fly   279 MQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANADLNARI 343
            .:..:.:::|.|:.|:..:|.:|.|.:..:....:|::..|..|..|...:.:||..|:.|...:
 Worm   302 AKQGKQDMESWYKLKVSEVQGSANRANMESTYQRDEVKRMRDNIGDLRGKLGDLENKNSLLEKEV 366

  Fly   344 RDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEA 408
            ::|..||.:|:.::...::..:..|.|:|||....:.|.|.|:|.|..||.|||.|.|:|.|||.
 Worm   367 QNLNYQLTDDQRQYEAALNDRDATLRRMREECQTLVAELQALLDTKQMLDAEIAIYRKMLEGEET 431

  Fly   409 RLNIT----PATNTATVQSFSQSLRNSTRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASA 469
            |:.:|    .|..|.::|  .|...:|||:.....:.....:|                    ||
 Worm   432 RVGLTQMVEQAVKTHSLQ--QQENTDSTRSVRGEVSTKTTFQR--------------------SA 474

  Fly   470 KGNVEIKEIDPEGKFVRLFNK-GSEEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWS 533
            ||||.|.|.||.|||::|.|. .:::..:|..:::|.::.: ....|....:|.|:|...:|:::
 Worm   475 KGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGR-REIVYSIPANVVIKPGKNLTIYA 538

  Fly   534 ADTKASHEPPSSLVMKSQK-WVSADNTRTILLNSEGE 569
            .|....:.||.|||...:. |....|..|.|:|.:||
 Worm   539 RDQGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 575

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lam	NP_001245892.1	Filament	54..409	CDD:278467	102/368 (28%)
		Ax_dynein_light	<283..377	CDD:287215	23/93 (25%)
		LTD	466..572	CDD:279300	35/106 (33%)
ifb-1	NP_001379694.1	Filament	81..432	CDD:365827	102/368 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	196	1.000	Domainoid score	I1825
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H7818
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D204815at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2618
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.950