Sequence 1: | NP_001245892.1 | Gene: | Lam / 33782 | FlyBaseID: | FBgn0002525 | Length: | 622 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034852.3 | Gene: | Lmnb2 / 16907 | MGIID: | 96796 | Length: | 615 | Species: | Mus musculus |
Alignment Length: | 651 | Identity: | 236/651 - (36%) |
---|---|---|---|
Similarity: | 364/651 - (55%) | Gaps: | 76/651 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ATPQPGN--------TS--TPRPPSAGPQPPPPSTHSQTASSPLSPTRHSRVAEKVELQNLNDRL 65
Fly 66 ATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIK 130
Fly 131 RLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERL 195
Fly 196 RKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEY 260
Fly 261 DAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDAL 325
Fly 326 NANINELE-QANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIK 389
Fly 390 VSLDLEIAAYDKLLVGEEARLNITPATNTATVQSFSQSLRNSTRATPSRRTPSAAV--------- 445
Fly 446 ----KRKRAVVDESEDHSVADYYVSASAKGN-----------VEIKEIDPEGKFVRLFNKGSEEV 495
Fly 496 AIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTKASHEPPSSLVMKSQ-KWVSADNT 559
Fly 560 RTILLNSEGEAVANLDRIKRIVSQHTS---SSRLSRRRSVTAVDGNEQLYHQQGDPQQSNEKCAI 621
Fly 622 M 622 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lam | NP_001245892.1 | Filament | 54..409 | CDD:278467 | 142/355 (40%) |
Ax_dynein_light | <283..377 | CDD:287215 | 26/94 (28%) | ||
LTD | 466..572 | CDD:279300 | 42/117 (36%) | ||
Lmnb2 | NP_034852.3 | Filament | 42..398 | CDD:306535 | 142/356 (40%) |
LTD | 465..569 | CDD:307195 | 42/108 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 270 | 1.000 | Domainoid score | I1818 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H7818 | |
Inparanoid | 1 | 1.050 | 391 | 1.000 | Inparanoid score | I1969 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48052 | |
OrthoDB | 1 | 1.010 | - | - | D204815at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8905 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103212 | |
Panther | 1 | 1.100 | - | - | O | PTHR45721 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2618 |
SonicParanoid | 1 | 1.000 | - | - | X632 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 14.010 |