DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt84

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_032500.2 Gene:Krt84 / 16680 MGIID:96700 Length:603 Species:Mus musculus


Alignment Length:495 Identity:128/495 - (25%)
Similarity:231/495 - (46%) Gaps:94/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GPQPPPPS--THSQTASSPLS---PTRHSRVA--EKVELQNLNDRLATYIDRVRNLETENSRLTI 84
            ||..|..:  |.:|:..:||:   .....||.  ||.:::.||::.|::||:||.||.:|..|  
Mouse   139 GPSAPAITAVTVNQSLLTPLNLEIDPNAQRVKRDEKEQIKTLNNKFASFIDKVRFLEQQNKLL-- 201

  Fly    85 EVQTTRDTVTRE----TTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDK 145
               .|:.:..:|    .:|::.:|:..:...||.||..:.|:|       ||..|...|::.|  
Mouse   202 ---ETKWSFLQEQKCARSNLEPLFDNYITNLRRQLDVLSSDQA-------RLQAERNHLQDIL-- 254

  Fly   146 KTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQET 210
                    ||..:.||...      ..:|||:                   .:|...:|:::...
Mouse   255 --------EGFKKKYEEEV------VFRANAE-------------------NEFVALKKDVDAAF 286

  Fly   211 LSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSE--IDGRLSSEYDAKLKQSLQELRA 273
            |::.|||..:.:|.:|..|...::.:||    .:.|:..||  :..::.:..|..|...:.|::|
Mouse   287 LNKSDLEANVDTLIQETEFLKALYHEEI----EMLQSHISETSVIVKMDNSRDLNLDGIIAEVKA 347

  Fly   274 QYEEQMQINRDEIQSLYEDKIQRLQEAAAR---TSNSTHKSIEELRSTRVRIDALNANINELEQA 335
            ||||..:.:|.:::|.|:.|.:.::..|.:   ...||...|.||  ||: |..|.|.|...:..
Mouse   348 QYEEVARRSRADVESWYQTKYEEMRVTAGQHCDNLRSTRDEINEL--TRL-IQRLKAEIEHTKAQ 409

  Fly   336 NADLNARIRDLERQLD---NDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIA 397
            .|.|.|.:.:.|:|.:   ||.:   .::..||..|.:.:::|.:||:|||:||::|::||:||.
Mouse   410 CAKLEAAVAEAEQQGEAALNDAK---CKLADLEGALQQAKQDMARQLREYQELMNVKLALDIEIV 471

  Fly   398 AYDKLLVGEEARL-------NITPATNTATVQSFSQSLRNSTRATPSRRT--PSAAVKRKRAVVD 453
            .|.:||.|||.|:       ||:.:::...|....:.:..|:.:.....|  .|::::....|:.
Mouse   472 TYRRLLEGEEIRICEGVGPVNISVSSSRGGVLCGPELVSGSSLSHNGGVTFSTSSSIRATGGVLA 536

  Fly   454 ESEDHSVADYYVSASAKGNVEIKE---------IDPEGKF 484
            .|...:..|...|.|..|:|.:.:         :..||.|
Mouse   537 SSSLRAGGDLLSSGSRGGSVLVGDACAPSIPCALPTEGGF 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 102/366 (28%)
LTD 467..572 CDD:460003 6/27 (22%)
Krt84NP_032500.2 Head 1..173 9/33 (27%)
Keratin_2_head 16..169 CDD:465068 7/29 (24%)
Filament 173..483 CDD:459643 102/366 (28%)
Coil 1A 174..208 13/38 (34%)
Linker 1 209..218 1/8 (13%)
Coil 1B 219..319 30/145 (21%)
Linker 12 320..336 2/15 (13%)
Coil 2 337..480 49/148 (33%)
Tail 481..603 18/96 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..603
Blue background indicates that the domain is not in the aligned region.

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