DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt34

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_081839.1 Gene:Krt34 / 16672 MGIID:1309994 Length:392 Species:Mus musculus


Alignment Length:418 Identity:109/418 - (26%)
Similarity:176/418 - (42%) Gaps:96/418 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PPSTHSQTASSPLS-PTRHSRV----------AEKVELQNLNDRLATYIDRVRNLETENSRLTIE 85
            |||.|..|.....: |......          .||..:|.||||||:|:::||.||.||:.|...
Mouse    23 PPSCHGCTLPGACNIPANVGNCNWFCEGSFNGNEKETMQFLNDRLASYMEKVRQLERENAELECR 87

  Fly    86 VQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKEC 150
            :|                      |..:..|.......:|      .:...|||:.|:     .|
Mouse    88 IQ----------------------ERNQQQDPLVCPAYQA------YFRTIEELQQKI-----LC 119

  Fly   151 TTAEGNVRMY------ESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQE 209
            ..:| |.|:.      :..:::...||....:.|:.:..|:|              ..|:.|::.
Mouse   120 AKSE-NARLVVQIDNAKLASDDFRTKYQTELSMRQLVEADIN--------------SLRRILDEL 169

  Fly   210 TLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDA----KLKQSLQE 270
            ||.:.|||..::||||||....:.|.:|:|..|       .::..||:.|.||    .|.:.|.|
Mouse   170 TLCKSDLEAQVESLREELLCLKKNHEEEVNTLR-------CQLGDRLNVEVDAAPTVDLNRVLNE 227

  Fly   271 LRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQA 335
            .|.|||..::.||.|::..:..:.:.|.:....:|       |:|:|.:..|..|...:|.||  
Mouse   228 TRCQYEALVETNRREVEEWFTTQSEELNKQVVSSS-------EQLQSCQAEIIELRRTVNALE-- 283

  Fly   336 NADLNAR--IRD-LERQLDNDRERHGQE-------IDLLEKELIRLREEMTQQLKEYQDLMDIKV 390
             .:|.|:  :|: ||..|.....|:..:       |..:|.:|..:|.::.:|.:|||.|:|::.
Mouse   284 -IELQAQHCMRNSLENTLTESEARYSSQLSQVQCLITNVESQLGEIRADLERQNQEYQVLLDVRA 347

  Fly   391 SLDLEIAAYDKLLVGEEARLNITPATNT 418
            .|:.||..|..||..|:..|...|...|
Mouse   348 RLECEINTYRSLLESEDCNLPCNPCATT 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 100/374 (27%)
LTD 467..572 CDD:460003
Krt34NP_081839.1 Head 1..56 6/32 (19%)
Filament 55..366 CDD:459643 100/375 (27%)
Coil 1A 57..91 17/55 (31%)
Linker 1 92..102 1/9 (11%)
Coil 1B 103..203 31/132 (23%)
Linker 12 204..219 5/14 (36%)
Coil 2 220..363 43/152 (28%)
Tail 364..392 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.

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