DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lam and LOC1277933

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_317447.5 Gene:LOC1277933 / 1277933 VectorBaseID:AGAMI1_014131 Length:575 Species:Anopheles gambiae


Alignment Length:649 Identity:280/649 - (43%)
Similarity:395/649 - (60%) Gaps:101/649 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSKSRRAG---TATPQPGNTSTPRPPSAGPQ-----PPPPSTHSQTASSPLSPTRHSRVAEKVE 57
            ||.|.::..   ::|....||:|...|| |.|     ....|:.|:::.:.|||:|.||:.||..
Mosquito     1 MSQKMKKPAAKPSSTTATANTNTAHTPS-GAQSVSSSASTVSSASESSETALSPSRRSRLHEKNS 64

  Fly    58 LQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDR 122
            |.|||||||.||:|||.||.|||||::|:.|.::|..||.:.:|:|:|.||.:.|:|||:||||:
Mosquito    65 LMNLNDRLACYIERVRYLEQENSRLSLELTTFQETAAREVSGLKSIYEHELADARKLLDETARDK 129

  Fly   123 ARAEIDIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNE 187
            |:.|||.||.|||||:|:.||:::|||.:..|...|..|||..||...||..:::||||.::|.|
Mosquito   130 AKVEIDAKRYWEENEQLRTKLNRRTKELSELEKEARANESRCIELTANYNTLSSERKKLQDELRE 194

  Fly   188 ALKELERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEI 252
            |.||.::||:.||:.||:.|.|||.||||||.||||||||:||:|:||||::||:..:|:|.|||
Mosquito   195 ADKESDKLRRTFEKMRKDYEHETLVRVDLENNIQSLREELTFKEQVHSQELSESKLRRQSEISEI 259

  Fly   253 DGRLSSEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRS 317
            ||.|..:|:.||:|:|||||.|||:|:::||:||..|:|                          
Mosquito   260 DGFLMEQYETKLQQTLQELRDQYEQQLRLNREEISDLFE-------------------------- 298

  Fly   318 TRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEY 382
                                   .|||.||.:|..:|.|:.:|...||::|..:|.||..|||:|
Mosquito   299 -----------------------GRIRALEERLVLERTRYDEEKAKLEQQLDGMRNEMAVQLKDY 340

  Fly   383 QDLMDIKVSLDLEIAAYDKLLVGEEARLNITP---ATNTATVQSFSQSLRNSTRATPSRRTPSAA 444
            |||||||:|||:|||||||||..||.||||||   :|:|....:|:.|.|       ..||||  
Mosquito   341 QDLMDIKISLDMEIAAYDKLLSSEETRLNITPNVTSTSTGGGSAFTSSSR-------LFRTPS-- 396

  Fly   445 VKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLFNKGSEEVAIGGWQL-QRLINE 508
            :||||..:|||.|:||.     .||||::|:.|.||||:|||:.||..:|.|:.|||| :|.:: 
Mosquito   397 LKRKRNNLDESIDYSVV-----TSAKGDIEVTECDPEGRFVRIANKSKQEYALAGWQLIRRPVD- 455

  Fly   509 KGPSTTYKFHRSVRIEPNGVITVWSADTKASHEPPSSLVMKSQKWVSADNTRTILLNSEGEAVAN 573
             |...:|:|.:|.:||.||::|||:.......:||:.||||...|...|...|:|:|.|||.:|.
Mosquito   456 -GAEVSYRFPKSAKIEGNGMVTVWATVANRKPDPPTDLVMKGALWTVTDAMSTVLVNEEGEEMAL 519

  Fly   574 LDRIKRI------VSQHTSS---------SRLSRRRSVTAVDGNEQLYHQQGDPQQSNEKCAIM 622
            ::|.:.:      ...|..|         |.||:..|    :|:|.  .:.|:  :::|:|::|
Mosquito   520 VERHRMMKPPKDKYFHHEESGGRLGVYGASGLSKSPS----NGSEA--GRVGN--KNDEQCSVM 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 175/354 (49%)
LTD 467..572 CDD:460003 47/105 (45%)
LOC1277933XP_317447.5 None

Return to query results.
Submit another query.