DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and KRT71

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_258259.1 Gene:KRT71 / 112802 HGNCID:28927 Length:523 Species:Homo sapiens


Alignment Length:474 Identity:117/474 - (24%)
Similarity:216/474 - (45%) Gaps:86/474 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PPPSTHSQTAS-SPLSP--------TRHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEV 86
            ||...|..|.: |.|:|        .:..|..|:.:::.||::.|::||:||.||.:|..|..:.
Human    98 PPGGIHQVTVNESLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKW 162

  Fly    87 QTTRDTVTRETTNIKN----IFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKT 147
            :..:..   :..|.||    |.|..:...|:.|:..:.||.|.:.:::.:.:..|:.|.:.:::.
Human   163 ELLQQL---DLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKKRYEEEI 224

  Fly   148 KECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLS 212
            .:.|.||                                          .:|...:|:::....:
Human   225 NKRTAAE------------------------------------------NEFVLLKKDVDAAYAN 247

  Fly   213 RVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAK--LKQSLQELRAQY 275
            :|:|:..::|:.:|:.|...:...||.:.    |:..|::...||.:.:..  |...:.|:|.||
Human   248 KVELQAKVESMDQEIKFFRCLFEAEITQI----QSHISDMSVILSMDNNRNLDLDSIIDEVRTQY 308

  Fly   276 EEQMQINRDEIQSLYEDKIQRLQEAAARTSN---STHKSIEELRSTRVRIDALNANINELEQANA 337
            ||....::.|.::||:.|.|.||.||.|..:   :|...|.||  ||: |..:.:.|..:::..:
Human   309 EEIALKSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISEL--TRL-IQRIRSEIENVKKQAS 370

  Fly   338 DLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKL 402
            :|...|.|.|::.||..:....::|.||..|.:.:||:.:.|:|||:||.:|::||:|||.|.||
Human   371 NLETAIADAEQRGDNALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKL 435

  Fly   403 LVGEEAR----------LNITPATNTATVQSFSQSL------RNSTRATPSRRTPSAAVKRKRAV 451
            |..||.|          ::|..:|:..:|..|..|:      .||:.......:......|.|..
Human   436 LESEECRMSGEFPSPVSISIISSTSGGSVYGFRPSMVSGGYVANSSNCISGVCSVRGGEGRSRGS 500

  Fly   452 VDESEDHSVADYYVSASAK 470
            .::.:|.......:||.:|
Human   501 ANDYKDTLGKGSSLSAPSK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 95/363 (26%)
LTD 467..572 CDD:460003 2/4 (50%)
KRT71NP_258259.1 Head 1..129 8/30 (27%)
Keratin_2_head 16..126 CDD:465068 7/27 (26%)
Filament 129..442 CDD:459643 95/364 (26%)
Coil 1A 130..165 12/34 (35%)
Linker 1 166..184 5/20 (25%)
Coil 1B 185..276 19/132 (14%)
Linker 12 277..300 5/22 (23%)
Coil 2 301..439 52/140 (37%)
Tail 440..523 15/80 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..523 6/28 (21%)

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