DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt7

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_149064.1 Gene:Krt7 / 110310 MGIID:96704 Length:457 Species:Mus musculus


Alignment Length:429 Identity:110/429 - (25%)
Similarity:203/429 - (47%) Gaps:81/429 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TSTPR---------PPSAGPQPPPPSTHSQTASSPLS----PT-RHSRVAEKVELQNLNDRLATY 68
            :|.||         |..||.:   ..|.:|:..:|||    || :..|..|:.:::.||::.|::
Mouse    38 SSRPRVAVRSAYGGPVGAGIR---EITINQSLLAPLSVDIDPTIQQVRQEEREQIKTLNNKFASF 99

  Fly    69 IDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLW 133
            ||:||.||.:|..|..:....::..:.:::.:..||||::...|:.|:....|..|.|::::.:.
Mouse   100 IDKVRFLEQQNKMLETKWALLQEQKSAKSSQLPRIFEAQIAGLRQQLETLQLDGGRLEVELRNMQ 164

  Fly   134 EENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQ 198
            :..|:.|||.:::....|.||                                          .:
Mouse   165 DVVEDFKNKYEEEINRRTAAE------------------------------------------NE 187

  Fly   199 FEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAK 263
            |...:|:::....::|:||....||::|::|...:|..|:.|    .|::.|:....||.:....
Mouse   188 FVLLKKDVDAAYTNKVELEAKADSLQDEINFLKTLHETELAE----LQSQISDTSVVLSMDNSRS 248

  Fly   264 LKQS--LQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALN 326
            |...  :.:::|||||....:|.|.::.|:.|.:.||..|.:..:....:..|:......|..|.
Mouse   249 LDLDGIIADVKAQYEEMANHSRAEAEAWYQTKFETLQAQAGKHGDDLRNTRNEIAEMNRSIQRLQ 313

  Fly   327 ANINELEQANADLNARIRDLERQ----LDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMD 387
            |.|:.|:...|.|.:.|.:.|.|    :.:...:.|:    ||..|.:.::::.:||:|||:|::
Mouse   314 AEIDTLKNQRAKLESSIAEAEEQGELAIKDAHAKQGE----LEAALQKAKQDVARQLREYQELLN 374

  Fly   388 IKVSLDLEIAAYDKLLVGEEARL--------NITPATNT 418
            .|::||:|||.|.|||.|||:||        ||:...:|
Mouse   375 TKLALDIEIATYRKLLEGEESRLSGDGMGPVNISVVNST 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 91/360 (25%)
LTD 467..572 CDD:460003
Krt7NP_149064.1 Head. /evidence=ECO:0000255 2..84 14/48 (29%)
Keratin_2_head 5..81 CDD:465068 13/45 (29%)
Filament 84..396 CDD:459643 91/361 (25%)
Coil 1A. /evidence=ECO:0000255 84..120 12/35 (34%)
Linker 1. /evidence=ECO:0000255 121..138 3/16 (19%)
Coil 1B. /evidence=ECO:0000255 139..230 24/136 (18%)
Linker 12. /evidence=ECO:0000255 231..254 5/22 (23%)
Coil 2. /evidence=ECO:0000255 255..393 43/141 (30%)
Tail. /evidence=ECO:0000255 394..457 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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