DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and Krt5

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_081287.1 Gene:Krt5 / 110308 MGIID:96702 Length:580 Species:Mus musculus


Alignment Length:421 Identity:108/421 - (25%)
Similarity:200/421 - (47%) Gaps:65/421 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GNTSTPRPPSAGPQPPPPSTHSQTASSPLS----PT-RHSRVAEKVELQNLNDRLATYIDRVRNL 75
            |....|..|..|.|   ..|.:|...:||:    || :..|..|:.:::.||::.|::||:||.|
Mouse   122 GGAGFPVCPPGGIQ---EVTVNQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFL 183

  Fly    76 ETENSRLTIEVQTTRDTVTRE-TTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEEL 139
            |.:|..|..:....::..|:. ..|:..:||..:...||.||....:|.|.:.:::.:.:..|:.
Mouse   184 EQQNKVLDTKWALLQEQGTKTIKQNLDPLFEQYINNLRRQLDGVLGERGRLDSELRNMQDLVEDY 248

  Fly   140 KNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRK 204
            |||.:.:..:.||||                                          .:|...:|
Mouse   249 KNKYEDEINKRTTAE------------------------------------------NEFVMLKK 271

  Fly   205 NLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAK--LKQS 267
            :::...:::|:||..:.:|.:|::|.......|:::    .||..|:....||.:.:..  |...
Mouse   272 DVDAAYMNKVELEARVDALMDEINFMKMFFDAELSQ----MQTHVSDTSVVLSMDNNRSLDLDSI 332

  Fly   268 LQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINEL 332
            :.|::||||:....:|.|.:|.|:.|.:.||:.|.|..:....:..|:......|..|.:.|:.:
Mouse   333 IAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRSEIDNV 397

  Fly   333 EQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIA 397
            ::..|:|...|.:.|::.:...:....::..||:.|.:.:::|.:.|:|||:||:.|::||:|||
Mouse   398 KKQCANLQNAIAEAEQRGELALKDARNKLTELEEALQKAKQDMARLLREYQELMNTKLALDVEIA 462

  Fly   398 AYDKLLVGEEARL--------NITPATNTAT 420
            .|.|||.|||.||        ||:..||:.:
Mouse   463 TYRKLLEGEECRLSGEGVGPVNISVVTNSVS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 90/357 (25%)
LTD 467..572 CDD:460003
Krt5NP_081287.1 Head. /evidence=ECO:0000255 1..161 12/41 (29%)
Keratin_2_head <127..158 CDD:465068 10/33 (30%)
Filament 161..474 CDD:459643 90/358 (25%)
Coil 1A. /evidence=ECO:0000255 162..197 12/34 (35%)
Linker 1. /evidence=ECO:0000255 198..216 4/17 (24%)
Coil 1B. /evidence=ECO:0000255 217..309 23/137 (17%)
Linker 12. /evidence=ECO:0000255 310..332 5/21 (24%)
Coil 2. /evidence=ECO:0000255 333..471 42/137 (31%)
Tail. /evidence=ECO:0000255 472..580 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 555..580
Blue background indicates that the domain is not in the aligned region.

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