DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and LOC100653049

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_003403930.1 Gene:LOC100653049 / 100653049 -ID:- Length:436 Species:Homo sapiens


Alignment Length:422 Identity:108/422 - (25%)
Similarity:182/422 - (43%) Gaps:104/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PPSTHSQTASSPLS-PTRHSRV----------AEKVELQNLNDRLATYIDRVRNLETENSRLTIE 85
            |||.|..|.....: |...|..          :||..:|.||||||:|:::||.||.:|:.|...
Human    65 PPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLNDRLASYLEKVRQLERDNAELEKL 129

  Fly    86 VQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDI-----KRLWEENEELKNKLDK 145
            :|                                 :|::.:..:     :..::..|||:.|:  
Human   130 IQ---------------------------------ERSQQQEPLLCPSYQSYFKTIEELQQKI-- 159

  Fly   146 KTKECTTAEG-----NVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKN 205
               .|..||.     |:...:..:::..:||....:.|..:..|:|              ..|:.
Human   160 ---LCAKAENARLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDIN--------------SIRRI 207

  Fly   206 LEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYD----AKLKQ 266
            |::.||.:.|||:.::||||||....:.|.:|:|..|       |::..||:.|.|    ..|.|
Human   208 LDELTLCKSDLESQVESLREELICLKKNHEEEVNTLR-------SQLGDRLNVEVDTAPTVDLNQ 265

  Fly   267 SLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINE 331
            .|.|.|:|||..::.||.|::..:..:.:.|.:....:|       |:|:|.:..|..|...:|.
Human   266 VLNETRSQYEALVETNRREVEQWFATQTEELNKQVVSSS-------EQLQSCQAEIIELRRTVNA 323

  Fly   332 LEQANADLNAR--IRD-LERQLDNDRERHGQE-------IDLLEKELIRLREEMTQQLKEYQDLM 386
            ||   .:|.|:  :|| ||..|......:..:       |..:|.:|..:|.::.:|.:|||.|:
Human   324 LE---IELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLL 385

  Fly   387 DIKVSLDLEIAAYDKLLVGEEARLNITPATNT 418
            |::..|:.||..|..||..|:.:|...|...|
Human   386 DVRARLECEINTYRSLLESEDCKLPCNPCATT 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643 98/378 (26%)
LTD 467..572 CDD:460003
LOC100653049XP_003403930.1 Filament 97..408 CDD:459643 98/379 (26%)
Blue background indicates that the domain is not in the aligned region.

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