DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lam and lmntd2

DIOPT Version :10

Sequence 1:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_031756494.1 Gene:lmntd2 / 100496703 XenbaseID:XB-GENE-29077399 Length:228 Species:Xenopus tropicalis


Alignment Length:102 Identity:29/102 - (28%)
Similarity:53/102 - (51%) Gaps:9/102 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 VEIKEIDPEGKFVRLFNKGSE-EVAIGG---WQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWS 533
            ::|.|::|.|.|||::|.... .|.:.|   |||:    ...|.:.|:|.:::.:.....:|||:
 Frog    13 LKIVEVNPFGHFVRIWNSSPFCHVDLSGYILWQLE----GNYPVSVYRFPQNIFLPACQHVTVWA 73

  Fly   534 ADTKASHEPPSSLVMKSQKWVSAD-NTRTILLNSEGE 569
            :.:|.||.||:.|..|.:.:...: ...|:|....|:
 Frog    74 SASKVSHNPPTDLRWKGRLYFRTNPQCITVLSRPTGQ 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamNP_476616.1 Filament 54..409 CDD:459643
LTD 467..572 CDD:460003 29/102 (28%)
lmntd2XP_031756494.1 LTD 9..110 CDD:460003 28/100 (28%)
Blue background indicates that the domain is not in the aligned region.

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