DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and UAP56b

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001154706.1 Gene:UAP56b / 830990 AraportID:AT5G11200 Length:486 Species:Arabidopsis thaliana


Alignment Length:481 Identity:295/481 - (61%)
Similarity:352/481 - (73%) Gaps:66/481 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADNDDLLDYEDEEQ--TETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHP 64
            |..::|||||:|::  .::....|.||.||.    ||.||||||||||||||:||||||.|||||
plant     9 AYEEELLDYEEEDEKVPDSGNKVNGEAVKKG----YVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69

  Fly    65 SEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKE 129
            |||||||||||:||||::|||||||||||||||:||||:|||.... ..||:|||||||:||..|
plant    70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQV-SALVLCHTRELAYQICNE 133

  Fly   130 YERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDE 194
            :.|||.|:|..||:||:||:.|:..::.||:..||||||||||:|||.|.|.|:||.::||:|||
plant   134 FVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 198

  Fly   195 CDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQD----------------- 242
            ||||||.|||||||||||:.|||.||||||||||||:|||||||||||                 
plant   199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVE 263

  Fly   243 ------------------------------------------PMEVYVDDEAKLTLHGLQQHYVN 265
                                                      |||:|||||||||||||.|||:.
plant   264 NSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIK 328

  Fly   266 LKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQF 330
            |.|.|||:||.:|||.|:|||||||||||.|...|::||.|.|||:|.||.||:|||||.||:.|
plant   329 LSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSF 393

  Fly   331 KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 395
            |:..|||||||:|.|||:||||||||.|||||:.:|||||||.|||||||||||||||:..:|::
plant   394 KEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSE 458

  Fly   396 ILNEVQDRFDVNISELPEEIDLSTYI 421
            :||:||:||:|:|.||||:||.|||:
plant   459 VLNQVQERFEVDIKELPEQIDTSTYM 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 155/266 (58%)
SF2_C_DEAD 259..388 CDD:350174 92/128 (72%)
UAP56bNP_001154706.1 DEADc_DDX39 45..249 CDD:350708 152/204 (75%)
PRK11776 53..476 CDD:236977 264/423 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 244 1.000 Domainoid score I563
eggNOG 1 0.900 - - E2759_KOG0329
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 591 1.000 Inparanoid score I229
OMA 1 1.010 - - QHG54017
OrthoDB 1 1.010 - - D779000at2759
OrthoFinder 1 1.000 - - FOG0001601
OrthoInspector 1 1.000 - - otm3068
orthoMCL 1 0.900 - - OOG6_101150
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1003
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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