DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel25E and ddx20

DIOPT Version :10

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001116795.2 Gene:ddx20 / 556273 ZFINID:ZDB-GENE-030131-202 Length:789 Species:Danio rerio


Alignment Length:430 Identity:147/430 - (34%)
Similarity:224/430 - (52%) Gaps:41/430 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EQTETTAVENQEAPKK------------DVKGTYVSIHSSG--FRDFLLKPEILRAIVDCGFEHP 64
            |:||.....|..|..|            ||      :.|.|  |...||...:|..:...||:.|
Zfish    19 EETERCRDRNMAASVKAAHELQSRTRTDDV------LISGGVEFSSLLLSKPVLEGLSASGFQRP 77

  Fly    65 SEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKE 129
            |.:|.:.||....|:|::.|||||.|||.||....|..| ..:|.|..|||:..|||:|.||...
Zfish    78 SPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDSL-ILENATTQVLVLAPTREIAVQIHAV 141

  Fly   130 YERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDE 194
            .......|..::..||.||..|.:|::.||.  .||.:|:||||..||....|.:..::.|||||
Zfish   142 VMAIGSAMEGLECHVFIGGRPISQDKQHLKK--CHIAIGSPGRIKQLIEMGALMVSSIRLFVLDE 204

  Fly   195 CDKMLEQLDMRRDVQE----IFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVD--DEAK 253
            .||:||. |.....||    |:.|.|..||::..|||..:.:.....::|::|..|.::  |...
Zfish   205 ADKLLED-DSSSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGL 268

  Fly   254 LTLHGLQQHYVNLKEN--------EKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFP 310
            |   ||:|:|..:..:        ||.:.|.||...:.|||.::|.....|...|:.:|:.:..|
Zfish   269 L---GLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP 330

  Fly   311 AIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARA 375
            |:.|..|::|::||....:.|.:|.|:|::|:|..||:|.|:||:|.|.|:|:|.:||:||:.||
Zfish   331 AVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRA 395

  Fly   376 GRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEI 415
            |||||.|:|:|:.....:...:..:..:..:::..||:.|
Zfish   396 GRFGTLGVAVTYCCHGEEENKMMAIAQKCSLDLMHLPDPI 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 80/213 (38%)
SF2_C_DEAD 259..388 CDD:350174 53/136 (39%)
ddx20NP_001116795.2 None

Return to query results.
Submit another query.