DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and ddx39ab

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_998142.1 Gene:ddx39ab / 406249 ZFINID:ZDB-GENE-040426-2902 Length:427 Species:Danio rerio


Alignment Length:425 Identity:358/425 - (84%)
Similarity:389/425 - (91%) Gaps:4/425 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADND---DLLDYEDEEQTETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFE 62
            ||:||   :|||||::|:.:..........||:|||:|||||||||||||||||:||||||||||
Zfish     1 MAENDVENELLDYEEDEEPQGAPESAAPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFE 65

  Fly    63 HPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQIS 127
            |||||||||||||:||||||||||||||||||||||||||:||.|... .|||||||||||||||
Zfish    66 HPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQV-SVLVMCHTRELAFQIS 129

  Fly   128 KEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVL 192
            ||||||||||||||||||||||:|:|||:.||...||||||||||||||:|||.||||.:|||||
Zfish   130 KEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVL 194

  Fly   193 DECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLH 257
            |||||||||||||||||:|||.|||.||.|||||||||:|||||:|||||||||:||||.|||||
Zfish   195 DECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 259

  Fly   258 GLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEE 322
            ||||:|..||:||||:|||:|||||||||||||||||||||||||||.|||||||.|||||.|||
Zfish   260 GLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEE 324

  Fly   323 RLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 387
            ||:|||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   325 RLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 389

  Fly   388 VSDENDAKILNEVQDRFDVNISELPEEIDLSTYIE 422
            ||||.||||||:|||||:||::|||||||:|||||
Zfish   390 VSDETDAKILNDVQDRFEVNVAELPEEIDISTYIE 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 181/207 (87%)
SF2_C_DEAD 259..388 CDD:350174 117/128 (91%)
ddx39abNP_998142.1 PTZ00424 19..417 CDD:185609 340/398 (85%)
DEADc 46..249 CDD:238167 177/203 (87%)
HELICc 261..389 CDD:238034 116/127 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595023
Domainoid 1 1.000 286 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E2759_KOG0329
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 717 1.000 Inparanoid score I621
OMA 1 1.010 - - QHG54017
OrthoDB 1 1.010 - - D274153at33208
OrthoFinder 1 1.000 - - FOG0001601
OrthoInspector 1 1.000 - - otm24747
orthoMCL 1 0.900 - - OOG6_101150
Panther 1 1.100 - - LDO PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1410
SonicParanoid 1 1.000 - - X1003
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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