DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel25E and abs

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster


Alignment Length:414 Identity:122/414 - (29%)
Similarity:212/414 - (51%) Gaps:26/414 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ENQEAPKKD----VKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDIL 82
            |.:||.:.:    |:|...|.....||:......||..:...|.::|:.:|.:.:|..:.|.|::
  Fly   154 EEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLI 218

  Fly    83 CQAKSGMGKTAVFVLATLQ-------QLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKY---- 136
            ..|.:|.|||.||||..:.       .|....|...:.|::|.:||||.|..:..:.:||:    
  Fly   219 GIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQAC 283

  Fly   137 -MPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLE 200
             ||.::..:..||:.:.:..:.:..|. ||||.||||::.::..|.|.|.:.::..:||.|:|::
  Fly   284 GMPEIRSCLAMGGLPVSEALDVISRGV-HIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMID 347

  Fly   201 QLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQ-HYV 264
             :....||:.||......:|.::||||:.|.|:...:..:..|:.:.|......:::..|| .||
  Fly   348 -MGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYV 411

  Fly   265 NLKENEKNKKLFELLDVLEFN--QVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRY 327
                 ::..|:..|||.|:..  .|:||.:..|....:.:.|..:...|:.||.|..||||....
  Fly   412 -----KQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAV 471

  Fly   328 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 392
            ..::..:|.:||||::..:|:|...|..|.|||||:|.:.|:||:.|.||..|||||.|.::...
  Fly   472 DAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTT 536

  Fly   393 DAKILNEVQDRFDVNISELPEEID 416
            :..:|.:::........|:|:.:|
  Fly   537 EQSVLLDLKHLLIEGKQEVPDFLD 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 62/219 (28%)
SF2_C_DEAD 259..388 CDD:350174 49/131 (37%)
absNP_524220.1 DEADc 179..393 CDD:238167 62/215 (29%)
DEXDc 192..397 CDD:214692 59/206 (29%)
Helicase_C 414..523 CDD:278689 39/108 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451361
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.