DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and Ddx1

DIOPT Version :10

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:396 Identity:99/396 - (25%)
Similarity:177/396 - (44%) Gaps:93/396 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NTCHVLVMCHTRELAFQISKEYERFSKYM--PTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPG 171
            |....::|..:||||.|...:.|:|..::  |.|:..:..||:.:::.:..|..|| ||||||||
  Fly   285 NAPQAIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGT-HIVVGTPG 348

  Fly   172 RILALIRNKKLNLKLLKH---FVLDECDKMLEQ-----LDMRRDVQEIFRSTPHGK--QVMMFSA 226
            |:..:|.:   .|.||.|   |||||.|.:|:|     :|  |..::|.:.|..|:  |:::.||
  Fly   349 RLEEMINS---GLVLLTHCRFFVLDEADALLKQGYTELID--RLHKQIPKITSDGRRLQMVVCSA 408

  Fly   227 TL-SKDIRPVCKKFMQDPMEV-----------------YVDDEAKLTLHGLQQHY----VNLKEN 269
            || :.:::.:.::.|..|..|                 .||.:...|...|:|..    |:.::|
  Fly   409 TLHAFEVKKMAERLMHFPTWVDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDN 473

  Fly   270 E-----------------KNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTE---QNFPAIGI 314
            .                 |.:.....:|....::.:||.::.|.|..|.:.|.:   :::..:.:
  Fly   474 VHPGNHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCL 538

  Fly   315 HRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 379
            |.....:||....:.||..|.:.|:.|::..||:||..:..:.|..:|:|...|:||:.|.||..
  Fly   539 HGDRKPQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAE 603

  Fly   380 TKGLAITFVSD---------------------------------ENDAKILNEVQDRFDVNISEL 411
            ..||||:.|:.                                 .|:..:|.||:|..::.|.::
  Fly   604 RMGLAISLVATVPEKVWYHGEWCKSRGRSCNNTNLTEVRGCCIWYNEPNLLAEVEDHLNITIQQV 668

  Fly   412 PEEIDL 417
            .:.:|:
  Fly   669 DKTMDV 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 51/168 (30%)
SF2_C_DEAD 259..388 CDD:350174 37/152 (24%)
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933
SrmB 283..613 CDD:440279 91/333 (27%)
Blue background indicates that the domain is not in the aligned region.

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