DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and CG5589

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster


Alignment Length:450 Identity:123/450 - (27%)
Similarity:204/450 - (45%) Gaps:82/450 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYEDEEQTETTAVE----NQ---EAPKKD---------------------------VKGTYVSIH 39
            |.:||:.||...::    ||   :.|||:                           |.|..|...
  Fly    49 DKDDEDITEFRLLDGDSSNQPKRKKPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPP 113

  Fly    40 SSGF----RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 100
            ...|    |||.:.|.:.:.::...|:||:.:|.:.:|..:....::..|.:|.|||..|:...:
  Fly   114 VDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPII 178

  Fly   101 QQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQK-DEETLKSGTP- 163
            ..|..........||:..|||||.||.:|....::   ...:...|    |.| .|...|.|.. 
  Fly   179 NGLRAHKTTGLRALVLAPTRELAQQIYRECAELTR---ETGLRTHF----ISKVSEAKQKHGAEC 236

  Fly   164 ----HIVVGTPGRILALIRNKK--LNLKLLKHFVLDECDKMLE--QLDMRRDVQEIFR--STPHG 218
                .|:|.||.|:..|::.:.  |:|..::.|||||.|:::|  |.:.:..:.:|:.  |.| .
  Fly   237 KQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNP-T 300

  Fly   219 KQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENE------KNKKLFE 277
            |.|..||||.:.   ||.|..::     ::.:..::|: |:|.......:.|      :..||..
  Fly   301 KCVAFFSATYTV---PVAKWALR-----HLKNLVRITI-GVQNSATETVQQELLFVGSEGGKLVA 356

  Fly   278 LLDVLEFN---QVVIFVKSVQRCVALSQLLTEQNFPAIG---IHRGMTQEERLNRYQQFKDFQKR 336
            :.|::...   .|::||:|.:|.   .||..|..:..|.   ||...:|.:|.|..:.|::....
  Fly   357 IRDLVRQGLQPPVLVFVQSKERA---KQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIW 418

  Fly   337 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKI 396
            :|:.|.|.|||:|.:.||:|.|||.|..:.:|:||:.|.||.|..|.||||.:.|:.:.:
  Fly   419 VLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 61/223 (27%)
SF2_C_DEAD 259..388 CDD:350174 45/140 (32%)
CG5589NP_649009.1 SrmB 87..594 CDD:223587 113/411 (27%)
P-loop_NTPase 123..329 CDD:304359 59/221 (27%)
HELICc 349..469 CDD:238034 42/122 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451357
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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