DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel25E and eif4a1b

DIOPT Version :10

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_958918.1 Gene:eif4a1b / 399484 ZFINID:ZDB-GENE-040120-6 Length:406 Species:Danio rerio


Alignment Length:408 Identity:144/408 - (35%)
Similarity:233/408 - (57%) Gaps:10/408 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYEDEEQTETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIP 73
            |||.  :......|..| |...::..:..|..| |.|..|:..:||.|...|||.||.:|...|.
Zfish     4 DYEG--RPRDNGPEGME-PDGVIESNWDEIVDS-FDDMNLRETLLRGIYAYGFEKPSAIQQRAIL 64

  Fly    74 QAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMP 138
            ..:.|.|::.||:||.||||.|.::.|||::.....| ..||:..|||||.||.|.......||.
Zfish    65 PCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGT-QALVLAPTRELAQQIQKVILALGDYMG 128

  Fly   139 TVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLD 203
            ....|. .||..::.:.:.|::..||||||||||:..::..|.|:.|.:|.|||||.|:||.: .
Zfish   129 ATCHAC-IGGTNVRNEVQKLQAEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSR-G 191

  Fly   204 MRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNL-K 267
            .:..:.|||:......||::.|||:..::..|..|||::|:.:.|..| :|||.|::|.|:|: |
Zfish   192 FKDQIYEIFQKLSTSIQVVLLSATMPAEVLDVTTKFMREPVRILVKKE-ELTLEGIRQFYINVEK 255

  Fly   268 ENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKD 332
            |..|...|.:|.:.|...|.|||:.:.::...|::.:..::|....:|..|.|::|....::|:.
Zfish   256 EEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRS 320

  Fly   333 FQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 397
            ...|:|:.|:|..||:|:::|::|.|||:|.:.:.|:||:.|.||||.||:||..|: |:|.:.|
Zfish   321 GSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVT-EDDKRTL 384

  Fly   398 NEVQDRFDVNISELPEEI 415
            .:::..::..:.|:|..:
Zfish   385 RDIETFYNTTVEEMPMNV 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 80/207 (39%)
SF2_C_DEAD 259..388 CDD:350174 45/129 (35%)
eif4a1bNP_958918.1 DEAD-like_helicase_N 20..406 CDD:475120 138/389 (35%)

Return to query results.
Submit another query.