DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and ddx39b

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_957237.1 Gene:ddx39b / 393917 ZFINID:ZDB-GENE-040426-1259 Length:435 Species:Danio rerio


Alignment Length:433 Identity:349/433 - (80%)
Similarity:385/433 - (88%) Gaps:12/433 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADND---DLLDYEDEEQTETTAVENQ--------EAPKKDVKGTYVSIHSSGFRDFLLKPEILR 54
            |.:||   :|||||::|.....|.:..        ...|:.|||:|||||||||||||||||:||
Zfish     1 MTENDVDNELLDYEEDEVDAGGAGDAGLGHSDGIISIRKEGVKGSYVSIHSSGFRDFLLKPELLR 65

  Fly    55 AIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHT 119
            |||||||||||||||||||||:||||:||||||||||||||||||||||||..... .|||||||
Zfish    66 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQV-SVLVMCHT 129

  Fly   120 RELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNL 184
            |||||||||||||||||||:|||||||||::|:||||.||..:||:|||||||||||.|||.|||
Zfish   130 RELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPGRILALSRNKSLNL 194

  Fly   185 KLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVD 249
            :.:|||:||||||||||||||||||||||.|||.||||||||||||:|||||:||||||||::||
Zfish   195 RHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVD 259

  Fly   250 DEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGI 314
            ||.|||||||||:||.||:||||:|||:||||||||||||||||||||:||:|||.|||||||.|
Zfish   260 DETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAI 324

  Fly   315 HRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 379
            ||.|.|:|||.|||||||||:||||||||||||||||||||.|||||||||||||||||||||||
Zfish   325 HRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFG 389

  Fly   380 TKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYIE 422
            |||||||||||||||:.||:|||||:|||||||||||:|:|||
Zfish   390 TKGLAITFVSDENDARTLNDVQDRFEVNISELPEEIDISSYIE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 177/207 (86%)
SF2_C_DEAD 259..388 CDD:350174 113/128 (88%)
ddx39bNP_957237.1 PTZ00424 54..425 CDD:185609 320/371 (86%)
DEADc 54..257 CDD:238167 174/203 (86%)
HELICc 271..397 CDD:238034 110/125 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 286 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E2759_KOG0329
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48376
Inparanoid 1 1.050 717 1.000 Inparanoid score I621
OMA 1 1.010 - - QHG54017
OrthoDB 1 1.010 - - D274153at33208
OrthoFinder 1 1.000 - - FOG0001601
OrthoInspector 1 1.000 - - otm24747
orthoMCL 1 0.900 - - OOG6_101150
Panther 1 1.100 - - LDO PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1410
SonicParanoid 1 1.000 - - X1003
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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