DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel25E and CG10333

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster


Alignment Length:465 Identity:135/465 - (29%)
Similarity:224/465 - (48%) Gaps:63/465 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNDDLLDYEDEEQTETTAVENQEAPKKD-----------VKGTYV-----SIHSSGFRDFLLK 49
            |...:|...::|...:|.   ||.|..::|           :||..:     |.:.|||     .
  Fly   346 MKRKEDKQKWDDRHWSEK---ENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESGF-----P 402

  Fly    50 PEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFV---------LATLQQLEP 105
            .||:..|...|::.|:.:|.:.||..:...||:..|::|.|||..|:         |..:::||.
  Fly   403 KEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLED 467

  Fly   106 SDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTP 170
            .|... :.::|..|||||.||.:|..:|.:.: .::..|..||::.::....|:.|. .||:.||
  Fly   468 VDQGP-YAIIMAPTRELAQQIEEETTKFGQPL-GIRTVVVVGGLSREEQGFRLRLGC-EIVIATP 529

  Fly   171 GRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTP------------------- 216
            ||::.::.|:.|.|....:.||||.|:|:: :....|||:|....|                   
  Fly   530 GRLIDVLENRYLVLNQCTYIVLDEADRMID-MGFEPDVQKILEYMPVTNLKPDTEEAEDETKLME 593

  Fly   217 ------HGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKL 275
                  ..:|.:||:||:...:..:.:.:::.|..||:....|.|....|..|: :.||:|.|||
  Fly   594 NFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYM-MGENDKRKKL 657

  Fly   276 FELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVA 340
            .|:|.......|:|||...:....|::.|.:..:.:..:|.|..||:|.......|...|.||||
  Fly   658 MEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVA 722

  Fly   341 TNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFD 405
            |::.|||:||:.|::|.||||.:..:.|.||:.|.||.|..|.||:||:.::.|...:..|....
  Fly   723 TDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSA 787

  Fly   406 VNISELPEEI 415
            ..:|..|.|:
  Fly   788 SPVSTCPPEL 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 65/241 (27%)
SF2_C_DEAD 259..388 CDD:350174 49/128 (38%)
CG10333NP_609888.2 DEADc 396..629 CDD:238167 64/241 (27%)
DEXDc 409..632 CDD:214692 61/226 (27%)
Helicase_C 651..761 CDD:278689 42/109 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451367
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.