DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and Hlc

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001285517.1 Gene:Hlc / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster


Alignment Length:396 Identity:100/396 - (25%)
Similarity:183/396 - (46%) Gaps:40/396 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
            |.:..|...||:|:...|::.|:.:|...||..:.|.|::.:|::|.||||.:.|..:|::..|.
  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNSK 75

  Fly   108 NNTCH----VLVMCHTRELAFQISKEYERFSKYM-PTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
            .|...    .:|:..|:||..|..|..|:..:.. ..|:||...........:....|.:|.|||
  Fly    76 LNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALSESPDIVV 140

  Fly   168 GTPGRILALIR-NKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKD 231
            .||..:||... ...::||.::..|:||.| ::......:|.:.:.:..|...|.::.||||:.|
  Fly   141 ATPANLLAYAEAGSVVDLKHVETLVVDEAD-LVFAYGYEKDFKRLIKHLPPIYQAVLVSATLTDD 204

  Fly   232 I---RPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDV-LEFNQVVIFVK 292
            :   :.:|   :.:|:.:.:::...:....|....:..:||:|...|:.||.: |...:.:|||.
  Fly   205 VVRMKGLC---LNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKLRLIRGKSIIFVN 266

  Fly   293 SVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVAT---------------- 341
            |:.||..:...|.:....|..::..:....|::...||......|::|:                
  Fly   267 SIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSATNR 331

  Fly   342 ---------NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 397
                     :...||:|.:.||.|.|:|.|.|..:|:||..|..|...||..::||| ..::|:.
  Fly   332 KSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLSFVS-MKESKVN 395

  Fly   398 NEVQDR 403
            :.|:.:
  Fly   396 DSVEKK 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 57/213 (27%)
SF2_C_DEAD 259..388 CDD:350174 38/154 (25%)
HlcNP_001285517.1 P-loop_NTPase 11..220 CDD:304359 57/212 (27%)
DEXDc 24..231 CDD:214692 52/210 (25%)
HELICc 234..386 CDD:238034 37/151 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451362
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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