DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and CG8611

DIOPT Version :10

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster


Alignment Length:507 Identity:123/507 - (24%)
Similarity:218/507 - (42%) Gaps:111/507 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DLLDYEDEEQTETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVD-CGFEHPSEVQH 69
            |..|.|..:|....||:    |.|:...|...|.:.|     |.|..::.:.| ......:.||.
  Fly   301 DQSDVEALKQLGQRAVK----PVKETIFTGSKISTLG-----LHPHAVKNLEDLLSIRELTSVQQ 356

  Fly    70 ECIPQAVLGMDILCQAKSGMGKTAVFVL---ATLQQLEPSDNNTCHV--LVMCHTRELAFQISKE 129
            :.||:.:.|.|:|.::::|.|||..:.|   ..||:.:|.......|  ||:..||||..|..:.
  Fly   357 KTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYEL 421

  Fly   130 YERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRIL-ALIRNKKLNLKLLKHFVLD 193
            .::..|....:......||.:.:.::..|:.|. :|::|||||:: .|:......|..|:..:||
  Fly   422 IQKLVKPYTWIVPGSLLGGESRKSEKARLRKGI-NILIGTPGRLVDHLLHTASFKLTKLQFLILD 485

  Fly   194 ECDKMLEQLDMRRDVQEIFRSTPHGK-----------QVMMFSATLSKDIRPVCKKFMQDPMEVY 247
            |.|::|| |...|||:::..:....:           |.|:.||||:..::.:....:::|:.:.
  Fly   486 EADRLLE-LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYID 549

  Fly   248 VDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVL-EFNQVVIFVKSVQ--------------RC 297
            ..|||.......:..|    :.|..:.|.|:.|.| |:.:.|..|.|:.              |.
  Fly   550 NSDEAASAALKSKDGY----QKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRL 610

  Fly   298 VALSQLLTEQ------NFPAI-------------------------------------------- 312
            ||||.||.::      .|.||                                            
  Fly   611 VALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPL 675

  Fly   313 -------GIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 370
                   .:|..|||.||...::.|:|....:|:||::.|||:|:..:.:|..|..|:.:..::|
  Fly   676 LQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVH 740

  Fly   371 RVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYIE 422
            ||.|..|.|.||.|:.|:: .::|:.:..::.: .:.|    ::.|:..|::
  Fly   741 RVGRTARAGRKGRAVLFLT-PSEAQFVRHLEKK-RIRI----QQGDMYAYLQ 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 58/225 (26%)
SF2_C_DEAD 259..388 CDD:350174 47/200 (24%)
CG8611NP_788922.1 PTZ00108 <6..263 CDD:240271
PRK11776 330..>770 CDD:236977 110/451 (24%)
DEADc_DDX31 339..549 CDD:350707 55/211 (26%)
DUF4217 806..866 CDD:464056
Blue background indicates that the domain is not in the aligned region.

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