DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel25E and Prp5

DIOPT Version :10

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:467 Identity:134/467 - (28%)
Similarity:229/467 - (49%) Gaps:60/467 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NDDLLDYEDEEQTE---TTAVENQEAPKKDV--------------KGTYVSI------------- 38
            |.|.|:|..|::.|   .|||......:|::              |..||.:             
  Fly   426 NMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEK 490

  Fly    39 HSSGFRDFLLK----PEILRAIVDC-------------GFEHPSEVQHECIPQAVLGMDILCQAK 86
            :.|......:|    |:.::....|             |||.|:.:|.:.||..:.|.|::..||
  Fly   491 YRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAK 555

  Fly    87 SGMGKTAVFVLATLQQL--EPS--DNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFG 147
            :|.|||..|:|...:.:  :||  |.:....::|..||||..||.|:..:|||.:....|.| :|
  Fly   556 TGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCV-YG 619

  Fly   148 GMAIQKDEETLKSGTPHIVVGTPGR---ILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQ 209
            |..|.:....||.|. .|:|.||||   :||....:..||:.:.:.||||.|:|.: :.....|.
  Fly   620 GTGISEQIAELKRGA-EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD-MGFEPQVM 682

  Fly   210 EIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKK 274
            .|..:....:|.:|||||..:.:..:.::.::.|:||.|...: :....::||.|.|.::.|..|
  Fly   683 RIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRS-VVCKEVEQHVVILNDDAKFFK 746

  Fly   275 LFELLDVL-EFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRIL 338
            |.|||.:. |...:::||...:....|.:.|.:.::|.:.:|.|:.|.:|.:....||..:.|:|
  Fly   747 LLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLL 811

  Fly   339 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDR 403
            :||::..||:|::.:.:|.|||:|...:.|:||..|.||.|.||.|.||::.| .::...::...
  Fly   812 IATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPE-QSRYAGDIIRA 875

  Fly   404 FDVNISELPEEI 415
            .|::.:.:|.|:
  Fly   876 MDLSGTLIPAEL 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 70/231 (30%)
SF2_C_DEAD 259..388 CDD:350174 45/129 (35%)
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 125/439 (28%)
KH-I_DDX46 1121..1223 CDD:411901
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.