DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel25E and uap56

DIOPT Version :9

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_594261.1 Gene:uap56 / 2542433 PomBaseID:SPAC17G6.14c Length:434 Species:Schizosaccharomyces pombe


Alignment Length:428 Identity:286/428 - (66%)
Similarity:346/428 - (80%) Gaps:12/428 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DDLLDYEDEE--------QTETTAVENQE-APKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG 60
            :||:|||:||        |..|.|.:..| ..|.|.||:||.|||:||||||||||:||||.|.|
pombe     6 EDLIDYEEEEELVQDQPAQEITPAADTAENGEKSDKKGSYVGIHSTGFRDFLLKPELLRAITDSG 70

  Fly    61 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQ 125
            ||||||||..||||::||.|:||||||||||||||||:||||:||.|... .|||:|||||||||
pombe    71 FEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEV-SVLVLCHTRELAFQ 134

  Fly   126 ISKEYERFSKYMPTVKVAVFFGGMAIQKDEETL--KSGTPHIVVGTPGRILALIRNKKLNLKLLK 188
            |..||.|||||:|.|:.|||:||:.|::|.|..  ||.:|||||.||||:.||:|.|.|.:..:|
pombe   135 IKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVK 199

  Fly   189 HFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAK 253
            |||||||||:||.:|||||:||:||:||..|||||||||||.:|||:||||||:|:|:|||||.|
pombe   200 HFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETK 264

  Fly   254 LTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGM 318
            |||||||||||.|:|..||:|:.:|||.|||||||||||||.|...|.:||.|.|||:|.||.|:
pombe   265 LTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGL 329

  Fly   319 TQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 383
            .||||:.||:.||||.|||.|||::||||:||||||||.|||||:..|:|||||.||||||||||
pombe   330 PQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGL 394

  Fly   384 AITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYI 421
            ||||.|.|.|::||:::|:||:|||:|||:|||:.:|:
pombe   395 AITFSSSEEDSQILDKIQERFEVNITELPDEIDVGSYM 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 146/209 (70%)
SF2_C_DEAD 259..388 CDD:350174 91/128 (71%)
uap56NP_594261.1 PTZ00424 53..426 CDD:185609 261/373 (70%)
DEADc 53..257 CDD:238167 143/204 (70%)
HELICc 272..398 CDD:238034 88/125 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 230 1.000 Domainoid score I506
eggNOG 1 0.900 - - E2759_KOG0329
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48376
Inparanoid 1 1.050 575 1.000 Inparanoid score I175
OMA 1 1.010 - - QHG54017
OrthoFinder 1 1.000 - - FOG0001601
OrthoInspector 1 1.000 - - oto101156
orthoMCL 1 0.900 - - OOG6_101150
Panther 1 1.100 - - LDO PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1410
SonicParanoid 1 1.000 - - X1003
TreeFam 1 0.960 - -
1413.860

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