DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel25E and Ddx19a

DIOPT Version :10

Sequence 1:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_031942.2 Gene:Ddx19a / 13680 MGIID:99526 Length:478 Species:Mus musculus


Alignment Length:433 Identity:136/433 - (31%)
Similarity:228/433 - (52%) Gaps:36/433 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EDEEQTETTA------------VENQ---EAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG 60
            |:||:.:..|            |:|.   |..::|......|:.|  |.:..|||::|:.:...|
Mouse    48 EEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKS--FEELRLKPQLLQGVYAMG 110

  Fly    61 FEHPSEVQHECIPQ--AVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELA 123
            |..||::|...:|.  |....:::.|::||.||||.||||.|.::||:|... ..|.:..|.|||
Mouse   111 FNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYP-QCLCLSPTYELA 174

  Fly   124 FQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKK-LNLKLL 187
            .|..|..|:..|:.|.:|:|....|..:::.::.    :..||:||||.:|......| ::.|.:
Mouse   175 LQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV----SEQIVIGTPGTVLDWCSKLKFIDPKKI 235

  Fly   188 KHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEA 252
            |.|||||.|.|:.....:.....|.|..|...|:::||||....:....:|.:.||..:.:..|.
Mouse   236 KVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE 300

  Fly   253 KLTLHGLQQHYV--NLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIH 315
            : ||..::|:||  |.:| ||.:.|..|...:...|.:||..:.:....|:..|:::......:.
Mouse   301 E-TLDTIKQYYVLCNNRE-EKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLS 363

  Fly   316 RGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSD------TYLHRVAR 374
            ..|..|:|....::|::.::::||.||:..||:|:|:|::|.|:|:|.|.|      |||||:.|
Mouse   364 GEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGR 428

  Fly   375 AGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISEL-PEEID 416
            .||||.:|||:..|..::...|||.:|:.|:..|..| .:::|
Mouse   429 TGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 69/210 (33%)
SF2_C_DEAD 259..388 CDD:350174 46/136 (34%)
Ddx19aNP_031942.2 N-terminal lobe. /evidence=ECO:0000250 2..299 78/257 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..53 3/4 (75%)
N-terminal helix. /evidence=ECO:0000250 54..67 1/12 (8%)
DEAD-like_helicase_N 74..302 CDD:475120 73/235 (31%)
Q motif 91..119 10/29 (34%)
DEAD box 241..244 2/2 (100%)
C-terminal lobe. /evidence=ECO:0000250 300..478 57/174 (33%)
SF2_C_DEAD 306..442 CDD:350174 46/136 (34%)

Return to query results.
Submit another query.