DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cap-D3 and Ncapd3

DIOPT Version :9

Sequence 1:NP_001162887.1 Gene:Cap-D3 / 33778 FlyBaseID:FBgn0051989 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_835214.2 Gene:Ncapd3 / 78658 MGIID:2142989 Length:1506 Species:Mus musculus


Alignment Length:1425 Identity:259/1425 - (18%)
Similarity:489/1425 - (34%) Gaps:426/1425 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IYSLVS--LVVLPEHVQQAAPQQLNENINMQLALNAATTYLLTLTIPGAKIFGVFDEDVIEQVLK 168
            |::|:.  |.:||:...:..||.:...|.:.:||.:                       .|.:..
Mouse   217 IFNLLKNFLRLLPKFSLKEKPQSIQTCIEVFVALTS-----------------------FEPIPH 258

  Fly   169 VFRLLEMNNNKSLR--ASMIWMFFLTICDDLKIVFRYVHFKEHLKTRDRIIRCLLEVLYMNFKMG 231
            .|.:.:..|...::  :.:.:.....:|..       ||.:|: |....|...:|.|:.| .::|
Mouse   259 KFLISQARNLNEVKHISELAYYGLYLLCSP-------VHGEEN-KVIGSIFHQMLNVILM-LEVG 314

  Fly   232 YQNTCAP--------GLHGKCFELFSEIANEHNGDVYETLHLIMRQTFPMHVYTDSPQMIAYGRR 288
            ..:.|||        ....:..:..|.:.:|....||..|..:::     |:.........| |.
Mouse   315 EGSRCAPLAITSQVINCRNQAVQFVSSLVDELQASVYPVLGTLLQ-----HICAKVVDKAEY-RT 373

  Fly   289 GAMQSGEHISDWFIQLIDKYPDIVNRILHFYIECVVSNPIKAWKSNDEKVAIGYAAKYDRV---- 349
            .|.||       .:||:.|.|                       |.:....|.:..||.|.    
Mouse   374 YAAQS-------LVQLLTKLP-----------------------SEEYATFIAWLYKYSRSSKIP 408

  Fly   350 --LFTKCNKSCADYVLEAVKADDAVGIQIRALDLIEKILLQESEVEWSIFRHEVSDVPREVPLLR 412
              :|| .:.:.|...|...:.||.|.::      .:|.|..:..|:..||.              
Mouse   409 HRVFT-LDVALALLTLPERELDDTVSLE------HQKFLKHKFFVQEIIFD-------------- 452

  Fly   413 EVLRCLNDRTLTVRRKACQVLILALRQGSPMTKKILQESIRFVQFDDTDVEALAEPSAQQNELRF 477
               ||| |:..|||.||.......|...|..|    .|||..:..:...|..:...|   |.:..
Mouse   453 ---RCL-DKAPTVRSKALSSFAHCLELSSSNT----SESILEIFINSNLVPGIQNLS---NTVLN 506

  Fly   478 EKPGIVQ---YAFSFQGHEQLETEVKNLP-----QTVYQRFLAADNGLARSAGIALLERLVLVNP 534
            ..|.:..   |:...:.|...|   :.||     .|:.::.:..:....|.:.:.:|        
Mouse   507 PSPVLTSRNGYSAQSRTHNNDE---QTLPGERCFMTMLRKRIKDEKINVRKSALQVL-------- 560

  Fly   535 LIIYNTNFVKETSLLAV------------DRLSSVRKSALETIETLLEAYSNCFALICVYCRIWA 587
                 .:.:|...:|::            |...||||.||:::..|:.|...|..:    .:.|.
Mouse   561 -----MSILKHCDILSMEQDLLILQDHCRDPAISVRKQALQSLTELVMAQPTCVPV----QKAWL 616

  Fly   588 C----LMSDEDVALQKLAISSFDRMVLKNIQPLE--YSNEAKHFMPWRIISTLLMTQP--RAYLQ 644
            .    ::.|.:..:|:.|:...|:::|:||:..:  :|.:....:.|.:::.|.:...  |.||.
Mouse   617 MGVIPVVMDCESTVQEKALECLDQLLLQNIKHHKKFHSADRSQVLAWSLLALLTIENQDLRRYLN 681

  Fly   645 ERFAVLLERETIVTPRLVNVIISHLSTSMATDAWGLLLFLSSRITNNMDAL-----IGIFNGLSS 704
            :.|.:..:::.. :...:|.:|||..|..:..||.||    |:||.:...|     |..:..||.
Mouse   682 KAFHIWSKKDKF-SSTFINSVISHTDTERSAPAWMLL----SKITCSSPKLDYTKIIESWERLSR 741

  Fly   705 YNMKSNQFLALQL-ITGCLRNFSKPALNQLFQKLLNALRTGSIWL-GIISSAVNLLNQIHHLSTS 767
            ....::..|...| :.|.:..............::.|...|..|. .:|||:|:.|.:   |..:
Mouse   742 EQSPNSNTLGYMLCVIGHIAKHLPKGTRDKITGVIKAKLNGFQWSPELISSSVDALQK---LCRA 803

  Fly   768 QSPTIASEMPYWQLSLLEDLVEGILSSAQNF-------------QEEYARLQCL--LGAYTELIV 817
            .:.|:..|.     .||:.:...:|::.:..             .:|...::|:  ||   ::..
Mouse   804 SAKTVLEEQ-----GLLKQVCGDVLATCEQHLSNILLKEDGTGNMDEGLVVKCIFTLG---DIAQ 860

  Fly   818 MVPQDVDNRIVSIVFKYL------------QECTKLCESE--FDSDNERMTNWM----IVIAGRL 864
            :.|..|:.|:..::...|            |..|...:|:  |...:..|.:.:    |:..|:|
Mouse   861 LCPAIVEKRVFLLIQSILASSAHSDHLPSSQGTTDALDSQPPFQPRSSAMPSVIRAHAIITLGKL 925

  Fly   865 SLRDNHLANSASKLYITILTKNDRPQIINTTLIALNDLGKKHPSILESNFQAILSKLQSKFAMTR 929
            .|:...||..:....:..|..::...:.|..:|.:.||..::..::::....|...|:......|
Mouse   926 CLQHEDLAKKSIPALVRELEVSEDVAVRNNVIIVICDLCIRYTVMVDNYIPNISVCLKDSDPFIR 990

  Fly   930 VRTFRCVKDVILSGNIKLKGPILISMLAALVDESAEVA-------------READAF-------- 973
            .:|...:.:::....:|.||.:....::.|||...::|             |....|        
Mouse   991 KQTLVLLTNLLQEEYVKWKGSLFFRFVSTLVDSHPDIASLGEFCLAHLLLKRNPTMFFQHFIECI 1055

  Fly   974 --FTRYKK--LYN---------------------------KMLFDHCLKECPFDLNDQAILR--G 1005
              |..|:|  .||                           |.|.:|...|..|::..:..|.  .
Mouse  1056 FHFNSYEKHGQYNKFSQSERGKQLFLLKGKTNKEKRMRIYKFLLEHFTDEQRFNVTSKICLNILA 1120

  Fly  1006 VRTNGNYKSPLKGSQM---------AKKRRLLYNHIMSSMD----ENVLL----LYFGQLKLLAE 1053
            ..|:|.....::.|::         :|:.:||.....:|.|    ::|.|    :...|:|::::
Mouse  1121 CFTDGILPMDMEASELLSDTFDILNSKEIKLLAMRAQTSKDLLEEDDVALANVVMQEAQMKIISQ 1185

  Fly  1054 KTRDQAFINNPDALIV-------------VQDMLFIMRRIC----------------------YC 1083
             .:.:.||.|...:|:             :::::..:|.:.                      |.
Mouse  1186 -VQKRNFIENIIPIIISLKTVLEKNKIPALRELMNYLREVMQDYRDEINDFFAVDKQLASELEYD 1249

  Fly  1084 TKGMGK---EKNSRGEGDNIDEG-EDASSEP--------------------ATPPTRPEAGEATS 1124
            .|...:   ::.:..|..|..:| ||:...|                    |.....|.|..|.:
Mouse  1250 MKKYNEQLAQEQALTEHANATKGPEDSDRVPSAQVAPDLEAVPALAAAPMAAAAAAAPMAAAAAA 1314

  Fly  1125 RGRGRKADMSEEPLKQLERCLRFVEETHRNIVPVMSPELSHN----FESFCRAMAMRFPNYIEFA 1185
            .|:    |.::.|..|..     ......|..|.: |.:|.|    ..|..|.|::.....:   
Mouse  1315 AGQ----DNADVPPTQSR-----PSAPRSNFTPTL-PPISENGPLKIMSSTRPMSLSTIAIL--- 1366

  Fly  1186 QPAQFWRQFRSSAKAPRASRSKRR-------RMEEGEVESHEEHES----ESDSDSELPLDRHKT 1239
                      :|.|...||:::.|       .:|.|..|:...|||    |.:||..:   .|.|
Mouse  1367 ----------NSVKKAVASKNRTRSLGALPFNVETGSPENPSSHESSLSLEKESDRTV---NHVT 1418

  Fly  1240 ------------------------TP----TASRLSQRKTSCDMLVTELIF----QPPDW 1267
                                    ||    |..:...::...|:|...|:.    |.|.|
Mouse  1419 KRAISTPENSISDVTFAAGVSYIGTPATFFTKEKHEAQEQGSDILCLSLLDKRPPQSPQW 1478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cap-D3NP_001162887.1 Cnd1 889..>999 CDD:289487 27/161 (17%)
Ncapd3NP_835214.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..194
HEAT 1 442..476 13/51 (25%)
HEAT repeat 483..524 CDD:293787 7/43 (16%)
HEAT 2 532..567 5/47 (11%)
VHS_ENTH_ANTH <538..603 CDD:383016 13/77 (17%)
HEAT repeat 538..566 CDD:293787 3/40 (8%)
HEAT 3 574..605 8/30 (27%)
HEAT repeat 575..600 CDD:293787 7/24 (29%)
HEAT repeat 611..641 CDD:293787 5/33 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 884..908 4/23 (17%)
HEAT repeat 936..965 CDD:293787 5/28 (18%)
Cnd1 951..1115 CDD:372266 27/163 (17%)
HEAT 4 968..1004 4/35 (11%)
HEAT repeat 973..1000 CDD:293787 4/26 (15%)
HEAT repeat 1011..1037 CDD:293787 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1317..1353 8/45 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1385..1412 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1473..1506 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836450
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0413
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006480
OrthoInspector 1 1.000 - - oto93204
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14222
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.800

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