DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and AT3G24200

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001030758.1 Gene:AT3G24200 / 822006 AraportID:AT3G24200 Length:507 Species:Arabidopsis thaliana


Alignment Length:492 Identity:153/492 - (31%)
Similarity:243/492 - (49%) Gaps:42/492 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RLLSVRLLASKSTTDMTTNRGESTQ--STSTE---HFDIIIGGGGLVGTTLAAALAKNSTLADKK 77
            |:|. |..::..|.|::|:....:.  :.||:   ..||.|.|||:||..|||:||.........
plant    19 RILQ-RTCSTVVTHDVSTSCSNESNALNNSTDDGPQHDIAIVGGGMVGIALAASLASKPLTKHLN 82

  Fly    78 VLLLEGAPEF-------RGFNPTGPYQNRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQVWE 135
            |.:::..|..       :|..|    ..|||.:...:|...|.|.|||:||..|:....:||||:
plant    83 VAIIDNNPLLGRRNIIEKGHQP----DPRVSTVTPATISFLKDIGAWKYIEQQRHAYFDKMQVWD 143

  Fly   136 SNTDALIQFQHDNFASDV-ACIIENDLILDAVYALAKESPNVEILNKARIQCV-RLPRDSNSNHS 198
            .......::..::...|| .|::||.::..:..:..:||...:.:..||:..: .||..|.:...
plant   144 YTGLGYTRYNANDVHQDVLGCVVENKVLQSSQLSCVQESDLQKTVYPARLNAMDMLPSSSLTGLG 208

  Fly   199 E---------------LQLEDGRNFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELG 248
            |               |:|.||......|::||||:.|.||:...:.....||.:..::.|:   
plant   209 EVPSTTDLFMRGRLAKLELSDGNRVYAKLVVGADGSKSRVRELAGIKTTGWNYSQNAIICTV--- 270

  Fly   249 EDACDNSVAWQRFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALPPTEFVDALNEAFCRQY-P 312
            |...:|..||||||||||:||||:.|:.|::||:...::|...:.:...:|:.|:|:|....| |
plant   271 EHTAENYTAWQRFLPNGPIALLPIGDKFSNIVWTMDPKEASDRKLMNEDDFIKAVNDALDSGYGP 335

  Fly   313 RVELADKAVQALNSLFGHN--GSQHQVQYPPRVCGVLDKSRATFPLGFLHASSYVCNGAALVGDA 375
            ..|..... .:|:.|.|..  .::.:.:.||:|. .|...|..|||...||..||....|||||:
plant   336 NPETTSSR-DSLSWLTGDATISAKERFETPPKVV-KLSSERMMFPLSLRHAKDYVSKRVALVGDS 398

  Fly   376 AHRVHPLAGQGVNLGFSDVRYLVESLAAGAYAGFKLGDKQHLIKYERKCLAKNVPIMLGVHGLHT 440
            ||.|||||||||||||:|...|.:::|.|...|..:|:...|.:||.:....|:.:|..:.|:..
plant   399 AHTVHPLAGQGVNLGFADACALSKAIAEGIALGTDIGEANLLKRYEAERKPANIAMMAVLDGIQK 463

  Fly   441 LYATQFSPVVLLRSLGLQLTQNLPPVKNLFMRGAMGQ 477
            :|:..|.|:..||:........:.|:|...:..|.|:
plant   464 MYSLDFGPLNALRAAAFHGAHYISPLKKRIISYASGE 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 138/444 (31%)
COQ6 58..471 CDD:273914 137/439 (31%)
AT3G24200NP_001030758.1 Ubi-OHases 55..499 CDD:273913 144/452 (32%)
NADB_Rossmann 55..494 CDD:304358 143/447 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 136 1.000 Domainoid score I1606
eggNOG 1 0.900 - - E1_COG0654
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6039
Inparanoid 1 1.050 221 1.000 Inparanoid score I1202
OMA 1 1.010 - - QHG54916
OrthoDB 1 1.010 - - D655400at2759
OrthoFinder 1 1.000 - - FOG0003239
OrthoInspector 1 1.000 - - oto2889
orthoMCL 1 0.900 - - OOG6_102655
Panther 1 1.100 - - LDO PTHR43876
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1881
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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