DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Coq6 and CTF2B

DIOPT Version :10

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_565688.1 Gene:CTF2B / 817522 AraportID:AT2G29720 Length:427 Species:Arabidopsis thaliana


Alignment Length:418 Identity:93/418 - (22%)
Similarity:145/418 - (34%) Gaps:125/418 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MTTNRGESTQSTSTEHFDIIIGGGGLVGTTLAAALAKNSTLADKKVLLLEGAPEFRGFNPTGPYQ 97
            :||.|.|::.....|  .::|.|||:.|...|.||.:   |..:.| :||.|...|    ||   
plant    29 LTTTRAETSGVDREE--KVVIVGGGIGGLATAVALHR---LGIRSV-VLEQAESLR----TG--- 80

  Fly    98 NRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDAL----------IQFQHDNFASD 152
                     ...|..|.:.|:.:::....|..:.|..|.....|          .:|: ||..|.
plant    81 ---------GASLTLSKNGWRVLDAISIGPQLRKQFLEMQGVVLKKEDGRELRSFKFK-DNDQSQ 135

  Fly   153 VACIIENDLILDAVYALAKESPNVEILNKARIQCVRLPRDSNSN-HSELQLEDGRNFSCDLLIGA 216
            ....:|..::|:   .||.:.|...|...::::.::    ||:| .:.|||:||..|..:::||.
plant   136 EVRGVERRVLLE---TLASQLPPQTIRFSSKLESIQ----SNANGDTLLQLKDGTRFLANIVIGC 193

  Fly   217 DGANSVVRKEMNVDVFSLNYDRMGLVATLELGEDACDNSVAWQRFLPNGP--------------- 266
            ||..|.|...|.   || ....:|..|...||            |.|||.               
plant   194 DGIRSKVATWMG---FS-EPKYVGYCAFRGLG------------FFPNGQPFQQKVNYIFGRGLR 242

  Fly   267 VALLPLTDRLSSLVWSTT----------------NEQAKMLQALPPTEFVDALNEAFCRQYPRVE 315
            ...:|::  .:.:.|..|                .::||.|.:..|.:..:.::........|..
plant   243 AGYVPVS--ATKVYWFITFNSPSLGPQMMDPAILRKEAKELVSTWPEDLQNLIDLTPDEAISRTP 305

  Fly   316 LADKAVQALNSLFGHNGSQHQVQYPPRVCGVLDKSRATFPLGFLHASSYVCNGAALVGDAAHRVH 380
            |||:.:.                  |.:.....|.|                 ..|||||.|.:.
plant   306 LADRWLW------------------PGIAPSASKGR-----------------VVLVGDAWHPMT 335

  Fly   381 PLAGQGVNLGFSDVRYLVESLAAGAYAG 408
            |..|||......|...|...||:....|
plant   336 PNLGQGACCALEDSVLLANKLASAINGG 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 COQ6 58..471 CDD:273914 84/393 (21%)
CTF2BNP_565688.1 UbiH 55..417 CDD:440419 83/390 (21%)

Return to query results.
Submit another query.