DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and sqlea

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001103509.1 Gene:sqlea / 799528 ZFINID:ZDB-GENE-071004-98 Length:557 Species:Danio rerio


Alignment Length:517 Identity:97/517 - (18%)
Similarity:165/517 - (31%) Gaps:181/517 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SKSTTDMTTNRGESTQSTSTEHFDIIIGGGGLVGTTLAAALAKNS---TLADKKV---------L 79
            |....|:...|...:|.:.||..::||.|.|::|:.:||.||::.   |:..:.:         |
Zfish    86 SSKKRDVKRKRATDSQCSPTEDPEVIIVGAGVLGSAMAAVLARDGRRVTVVGRDMKEPDRIVGEL 150

  Fly    80 LLEGAPEFRGFNPTGPYQNRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQF 144
            |..|.  ||.....| .:..|..::.:.:..:...|                  .||.|:..|.:
Zfish   151 LQPGG--FRVLKDLG-LEGTVEGLDAHVVNGYVIHD------------------MESRTEVEIPY 194

  Fly   145 -QHDNFASDVACI-----IENDLILDAVYALAKESPNVEILNKARIQCVRLPRDSNSNHSELQLE 203
             |.:|      ||     ..:...:..:...|...|||:.:              ....:.|:.|
Zfish   195 PQQEN------CIQGGRAFHHGRFIMGLRRAALAEPNVKFV--------------EGTVTSLEEE 239

  Fly   204 DG---------------RNFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELGEDACD 253
            :|               :.....|.|.|||..|..||.:......::...:|.:           
Zfish   240 EGCVTGIQYREKDTGMLKEVRAPLTIVADGCFSKFRKNLVSGKVRVSSHFVGCI----------- 293

  Fly   254 NSVAWQRFLPNGPV-----ALLPLTDRLSSLVWSTTNEQAKML---QALPPTEFVDALNEAFCRQ 310
                    :.:.|.     |.|.|.|....|::..::.:.::|   :...|.:.:..:.:....|
Zfish   294 --------MKDSPQFKAHHAELVLADPSPVLIYQISSNETRVLVDIRGEMPRDLMQYMTDKIYPQ 350

  Fly   311 YPRVELADKAVQALNSLFGHNGSQHQVQYPPRVCGVLDKSRATFPLGFLHASSYVCNGAALVGDA 375
            .|. .|.:..:.||.:                     |:.| |.|..||..:.....|..|:|||
Zfish   351 LPE-HLKEPFMLALQN---------------------DRLR-TMPASFLPPAPVNKQGVLLLGDA 392

  Fly   376 AHRVHPLAGQGVNLGFSDV----------------------------------RYLVESLAAGAY 406
            .:..|||.|.|:::..:||                                  .::|..|....|
Zfish   393 YNMRHPLTGGGMSVVLNDVSIWRDLLKNIPDLYDNTALLQAKKKFHWERKSSHSFVVNVLTQALY 457

  Fly   407 AGFKLGDKQ---------HLIKYERKCLAKNVPI------------MLGVHGLHTLYATQFS 447
            ..|...||.         |..|...:|:  |.||            ::|......|||..||
Zfish   458 ELFAATDKSLHQLRKACFHYFKLGGECI--NGPIGLLSVLSPKPLTLIGHFFAVALYAIYFS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 87/486 (18%)
COQ6 58..471 CDD:273914 87/486 (18%)
sqleaNP_001103509.1 UbiH 109..482 CDD:223727 81/455 (18%)
NADB_Rossmann 110..>278 CDD:304358 41/208 (20%)
NADB_Rossmann 261..530 CDD:304358 58/301 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0654
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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