DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and sqlea

DIOPT Version :10

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001103509.1 Gene:sqlea / 799528 ZFINID:ZDB-GENE-071004-98 Length:557 Species:Danio rerio


Alignment Length:517 Identity:97/517 - (18%)
Similarity:165/517 - (31%) Gaps:181/517 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SKSTTDMTTNRGESTQSTSTEHFDIIIGGGGLVGTTLAAALAKNS---TLADKKV---------L 79
            |....|:...|...:|.:.||..::||.|.|::|:.:||.||::.   |:..:.:         |
Zfish    86 SSKKRDVKRKRATDSQCSPTEDPEVIIVGAGVLGSAMAAVLARDGRRVTVVGRDMKEPDRIVGEL 150

  Fly    80 LLEGAPEFRGFNPTGPYQNRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQF 144
            |..|.  ||.....| .:..|..::.:.:..:...|                  .||.|:..|.:
Zfish   151 LQPGG--FRVLKDLG-LEGTVEGLDAHVVNGYVIHD------------------MESRTEVEIPY 194

  Fly   145 -QHDNFASDVACI-----IENDLILDAVYALAKESPNVEILNKARIQCVRLPRDSNSNHSELQLE 203
             |.:|      ||     ..:...:..:...|...|||:.:              ....:.|:.|
Zfish   195 PQQEN------CIQGGRAFHHGRFIMGLRRAALAEPNVKFV--------------EGTVTSLEEE 239

  Fly   204 DG---------------RNFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELGEDACD 253
            :|               :.....|.|.|||..|..||.:......::...:|.:           
Zfish   240 EGCVTGIQYREKDTGMLKEVRAPLTIVADGCFSKFRKNLVSGKVRVSSHFVGCI----------- 293

  Fly   254 NSVAWQRFLPNGPV-----ALLPLTDRLSSLVWSTTNEQAKML---QALPPTEFVDALNEAFCRQ 310
                    :.:.|.     |.|.|.|....|::..::.:.::|   :...|.:.:..:.:....|
Zfish   294 --------MKDSPQFKAHHAELVLADPSPVLIYQISSNETRVLVDIRGEMPRDLMQYMTDKIYPQ 350

  Fly   311 YPRVELADKAVQALNSLFGHNGSQHQVQYPPRVCGVLDKSRATFPLGFLHASSYVCNGAALVGDA 375
            .|. .|.:..:.||.:                     |:.| |.|..||..:.....|..|:|||
Zfish   351 LPE-HLKEPFMLALQN---------------------DRLR-TMPASFLPPAPVNKQGVLLLGDA 392

  Fly   376 AHRVHPLAGQGVNLGFSDV----------------------------------RYLVESLAAGAY 406
            .:..|||.|.|:::..:||                                  .::|..|....|
Zfish   393 YNMRHPLTGGGMSVVLNDVSIWRDLLKNIPDLYDNTALLQAKKKFHWERKSSHSFVVNVLTQALY 457

  Fly   407 AGFKLGDKQ---------HLIKYERKCLAKNVPI------------MLGVHGLHTLYATQFS 447
            ..|...||.         |..|...:|:  |.||            ::|......|||..||
Zfish   458 ELFAATDKSLHQLRKACFHYFKLGGECI--NGPIGLLSVLSPKPLTLIGHFFAVALYAIYFS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 COQ6 58..471 CDD:273914 87/486 (18%)
sqleaNP_001103509.1 FixC 115..405 CDD:440409 68/372 (18%)
Rossmann-fold NAD(P)(+)-binding proteins 261..530 CDD:473865 58/301 (19%)

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