DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and sqleb

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_017207816.2 Gene:sqleb / 565329 ZFINID:ZDB-GENE-060503-750 Length:492 Species:Danio rerio


Alignment Length:442 Identity:87/442 - (19%)
Similarity:154/442 - (34%) Gaps:119/442 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DIIIGGGGLVGTTLAAALAKNSTLADKKVLLLEGA---PE-----------FRGFNPTGPYQNRV 100
            |:||.|.|::|::||:.|.::.    :||.::|.:   |:           :|.....| .:..|
Zfish    39 DVIIVGAGVLGSSLASVLGQDG----RKVTVIERSLREPDRIVGELLQPGGYRALIELG-LEKSV 98

  Fly   101 SAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQFQHDNFASDVACIIENDLILDA 165
            ..:|...:..:       .|.....:.|.::...|........|.|..|             :..
Zfish    99 EGLNAQIVNGY-------IIHDTESRMVVEIPYSEDQDQCGRAFHHGRF-------------IMG 143

  Fly   166 VYALAKESPNVEILN------KARIQCVRLPRDSNSNHSELQLEDGRNFSCDLLIGADGANSVVR 224
            :...|...|||..:.      :....||:..:..:.:..::|     .....|.:.|||..|..|
Zfish   144 LRRAALAEPNVRFIEGTVTYLEEENGCVKGVQYKDKDSGKIQ-----RLHAPLTVVADGCFSNFR 203

  Fly   225 KEMNVDVFSLNYDRMGLVATLELGEDACDNSVAWQRFLPNGP-----VALLPLTDRLSSLVWSTT 284
            |.::.:...:                 |.|.|..  .:.|.|     .|.|.|:.....|::..:
Zfish   204 KSLSSETVQV-----------------CSNFVGC--IMKNSPQLKPNYAELVLSCHGPLLIYQIS 249

  Fly   285 NEQAKML---QALPPTEFVDALNEAFCRQYPRVELADKAVQALNSLFGHNGSQHQVQYPPRVCGV 346
            :...::|   |...|...         :||...|:..|....|..              |.:..|
Zfish   250 STDTRVLVDIQGRLPKNL---------KQYMTEEIHPKLPDHLKE--------------PFLLAV 291

  Fly   347 LDKSRATFPLGFLHASSYVCNGAALVGDAAHRVHPLAGQGVNLGFSDVRY----------LVESL 401
            .:....:.|..||.:|.....|..|:|||.:..|||.|.|:::..:|||.          |.:..
Zfish   292 QNNRLKSMPASFLPSSPVSKPGVLLLGDAYNMRHPLTGGGMSVALNDVRIWRRLLHHIPDLTDHT 356

  Fly   402 AAGAYAGFKLGDKQHLIKYERKCLAKNVPIMLGVHGLHTLYATQFSPVVLLR 453
            |        |...:....:||| |:.:..:.:....||.|:|:|...::.||
Zfish   357 A--------LSKAKKTFDWERK-LSHSFVVDILAQTLHELFASQDDSILYLR 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 82/434 (19%)
COQ6 58..471 CDD:273914 82/434 (19%)
sqlebXP_017207816.2 FAD_binding_3 39..>205 CDD:332373 36/195 (18%)
NADB_Rossmann 188..465 CDD:328723 57/263 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0654
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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