DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and coq6

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001006829.1 Gene:coq6 / 448564 XenbaseID:XB-GENE-945926 Length:464 Species:Xenopus tropicalis


Alignment Length:480 Identity:206/480 - (42%)
Similarity:272/480 - (56%) Gaps:43/480 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LASAGQARLLSVRLLASKSTTDMTTNRGESTQSTSTEHFDIIIGGGGLVGTTLAAALAKNSTLAD 75
            |..:..:|||  |:|:.        ::|.:..||....:|::|.|||:|||.:|.||..:..|..
 Frog     4 LGGSSLSRLL--RMLSQ--------SQGRALSSTGPAVYDVVISGGGMVGTAMACALGSDPHLQH 58

  Fly    76 KKVLLLEGA--------PEFRGFNPTGPYQNRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQ 132
            |||||||..        ||        .:.||||:|...|..|..|..||.||.:.|.||.|:||
 Frog    59 KKVLLLEAGNRKPFDHLPE--------NFSNRVSSITPGSATLLASFGAWDHILAMRLKPYKRMQ 115

  Fly   133 VWESNTDALIQFQHDNFASDVACIIENDLILDAVYALAKE----SPNVEILNKARIQCVRLPRDS 193
            ||::.:||||.|..|.. .|:..|:|||:|::   ||.|:    |.:||::.::|......|...
 Frog   116 VWDACSDALITFDKDAL-EDMGYIVENDIIIE---ALTKQLELMSDHVEVMYRSRALSYSWPPPY 176

  Fly   194 NSNHS----ELQLEDGRNFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELGEDACDN 254
            |:..:    |::|.||:.....|||||||.||:||....:.....||:...:||||.|.| |.||
 Frog   177 NNGKATPWVEIELADGQRLHTKLLIGADGHNSMVRSAAGMQSVQWNYNHAAVVATLHLSE-ATDN 240

  Fly   255 SVAWQRFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALPPTEFVDALNEAFCRQYPRVELADK 319
            :||||||||.||:|||||:|..|||||||:.|.|..|.::....|||.:|.||.......|....
 Frog   241 NVAWQRFLPTGPIALLPLSDTCSSLVWSTSPEHASELVSMDEESFVDTVNSAFWSNENHSEFITS 305

  Fly   320 AVQALN---SLFGHNGSQHQVQYPPRVCGVLDKSRATFPLGFLHASSYVCNGAALVGDAAHRVHP 381
            |...|:   |.|...||..: |.||.|..|...|||:||||..||:.|:.:..||:|||||||||
 Frog   306 AGSLLHSALSFFMPTGSSPR-QLPPSVSRVEQNSRASFPLGLKHATEYIRHRVALIGDAAHRVHP 369

  Fly   382 LAGQGVNLGFSDVRYLVESLAAGAYAGFKLGDKQHLIKYERKCLAKNVPIMLGVHGLHTLYATQF 446
            |||||||:||.||..|...|:..|:.|..||..:||::||.:....|:|:|..|..|..||.|:.
 Frog   370 LAGQGVNMGFGDVACLAHHLSQAAFNGSDLGSTKHLLEYETERQRHNLPLMAAVDLLKRLYNTKQ 434

  Fly   447 SPVVLLRSLGLQLTQNLPPVKNLFM 471
            .|:||||:||||.|..|.|||...|
 Frog   435 PPIVLLRTLGLQATNALTPVKEQIM 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 192/433 (44%)
COQ6 58..471 CDD:273914 191/431 (44%)
coq6NP_001006829.1 NADB_Rossmann 32..459 CDD:419666 196/440 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I6978
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6039
Inparanoid 1 1.050 334 1.000 Inparanoid score I2371
OMA 1 1.010 - - QHG54916
OrthoDB 1 1.010 - - D418762at33208
OrthoFinder 1 1.000 - - FOG0003239
OrthoInspector 1 1.000 - - otm48496
Panther 1 1.100 - - LDO PTHR43876
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R236
SonicParanoid 1 1.000 - - X1881
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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