DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and kmo

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001006690.1 Gene:kmo / 448312 XenbaseID:XB-GENE-966665 Length:473 Species:Xenopus tropicalis


Alignment Length:393 Identity:86/393 - (21%)
Similarity:140/393 - (35%) Gaps:130/393 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IIIGGGGLVGTTLAAALAKNSTLADKKVLLLEGAPEFRGFNPTGPYQNRVS------AINHNSIE 109
            :.:.||||||:..|...||...    :|.|.|...:.|       |...||      |::|..::
 Frog    11 VSVVGGGLVGSLNACFFAKKGF----QVELYEAREDIR-------YARMVSGRSINLALSHRGLQ 64

  Fly   110 LFKSIDAWKHIESARYKPVKQMQVWE-SNTDALIQF--QHDNFASDVACIIENDLILDAVYALAK 171
            ..|::...:.| :|...|::...:.. ....:.|.:  ||....|.....:..:|:     :.|:
 Frog    65 ALKAVGLDEKI-AAMGIPMRARMIHSVKGRKSSIPYGKQHQYILSVDRANLNKELL-----SAAE 123

  Fly   172 ESPNVEILNKARIQCVRLPRDSNSNHSEL----QLEDGRNFSCDLLIGADGANSVVRKE-MNVDV 231
            :..||.:..:.::      ||.|.:...:    .:|:......||::|.|||.|||||: |....
 Frog   124 KYSNVTMHFEHKL------RDCNVDSGTMTFLNNMENIIEKKADLIVGCDGAFSVVRKQFMRKSR 182

  Fly   232 FSLNYDRMGLVATLELGEDACDNSVAWQRFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALPP 296
            |  ||..:                     ::|:|...|                       .:||
 Frog   183 F--NYSHV---------------------YIPHGYKEL-----------------------TIPP 201

  Fly   297 TEFVDALNEAFCRQYPRVELADKAVQALNSLFG-------------HNGSQHQVQYPPRVCGVLD 348
            .:...|:...:...:||......|:..|:..|.             ..|.|           |||
 Frog   202 RKGEFAMEPNYLHIWPRNTFMMIALPNLDKSFTCTLFMPFEDFEKLTTGDQ-----------VLD 255

  Fly   349 KSRATFP-----LG--------FL---------HASSY-VCNGAALVGDAAHRVHPLAGQGVNLG 390
            ..:..||     :|        ||         ..||: :.:...::|||||.|.|..|||:|.|
 Frog   256 FFKTYFPDSIELIGEKKLTEDFFLLPPQAMISVKCSSFCIDHKCVIMGDAAHAVVPFYGQGMNAG 320

  Fly   391 FSD 393
            |.|
 Frog   321 FED 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 83/386 (22%)
COQ6 58..471 CDD:273914 83/386 (22%)
kmoNP_001006690.1 UbiH 24..370 CDD:223727 80/380 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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