DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and kmo

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001314753.2 Gene:kmo / 368242 ZFINID:ZDB-GENE-030424-4 Length:474 Species:Danio rerio


Alignment Length:427 Identity:101/427 - (23%)
Similarity:150/427 - (35%) Gaps:135/427 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MTTNRGESTQSTSTEHFDIIIGGGGLVGTTLAAALAKNSTLADKKVLLLEGAPEFRGFNPTGPYQ 97
            |.|......||:|::...|.:.||||||:..|..|||                  |||: ...|:
Zfish     1 METAFSHPPQSSSSKRKVIAVVGGGLVGSLNACFLAK------------------RGFD-VEVYE 46

  Fly    98 NR-----VSAINHNSIEL---FKSIDAWKHIES-----ARYKPVKQMQVWESNTDALIQFQHDNF 149
            :|     ...:...||.|   .:...|.||:..     ::..|:....:...|          ..
Zfish    47 SREDIRQAKVVKGRSINLALSHRGRQALKHVGMEDKIVSKGIPMHARMIHNVN----------GK 101

  Fly   150 ASDVACIIENDLILDAVYALAKESPNVEILNKAR-IQCVRLPRDSNSNHSELQL----------- 202
            .|.:....:...||    ::.:.:.|.|:|..|. ....||    |.||   :|           
Zfish   102 RSPIPYGKKGQYIL----SVDRANLNKELLTAAEAYPNTRL----NFNH---KLHDWSPKTGTMT 155

  Fly   203 ---EDGR--NFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELGEDACDNSVAWQRFL 262
               .||:  ....||::|.|||.|.|||:. :.....||.                     |.::
Zfish   156 FIGSDGQKTETQADLIVGCDGAFSAVRKQF-LRQSRFNYS---------------------QTYI 198

  Fly   263 PNGPVAL-LPLTDRLSSL------VWSTTNEQAKMLQALPPTE--FVDALNEAFCRQYPRVELAD 318
            |:|.:.| :|..|...::      :|.   ....|:.|||..:  |...|...| ..:.::...|
Zfish   199 PHGYMELTMPPKDGDFAMEPNYLHIWP---RNTFMMIALPNLDRTFTCTLFMPF-EDFEKIRTGD 259

  Fly   319 KAVQALNSLFGHNGSQHQVQYPPRV--CGVLDKSRATFPLGFLHASSYVC------NGAALVGDA 375
            :.::..:..|           |..|  .||....:..|.|......|..|      ....|:|||
Zfish   260 ELLRFFHKYF-----------PDSVPLIGVEALKQDFFRLPAQAMVSVKCCPYHLFEKCVLMGDA 313

  Fly   376 AHRVHPLAGQGVNLGFSDVRYLV---------ESLAA 403
            ||.|.|..|||:|.||.|.  ||         |:|||
Zfish   314 AHAVVPFYGQGMNAGFEDC--LVFDEIMDQFNENLAA 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 92/402 (23%)
COQ6 58..471 CDD:273914 92/402 (23%)
kmoNP_001314753.2 UbiH 19..369 CDD:223727 96/409 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0654
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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